Code

Refactor/logging#519

Code

Merged

schroedk merged 59 commits into0.5.0optimagic-dev/optimagic:0.5.0from refactor/loggingoptimagic-dev/optimagic:refactor/loggingCopy head branch name to clipboardAug 19, 2024

+2,330-1,332

Commits

Commits on Aug 9, 2024

• Add simple wrapper abstractions for logging tables

  schroedk

  committed
  9a95f92

• Add abstraction of a key value store, which serves as interface for storing iteration, step and problem information

  schroedk

  committed
  1fc3eb9

• Add type definitions to describe iteration, step and problem information

  schroedk

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  ccb46f2

• Implement a sqlalchemy table acting as a KeyValueStore

  schroedk

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  4f59893

• Add sqlite implementations for iteration, step and problem store

  schroedk

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  12c03fb

• Add tests for sqlite implementations

  schroedk

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  d8075de

• Remove obsolete file

  schroedk

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  3a8493f

• Refactor logging types:

  Show description for a38243c
  schroedk

  committed
  a38243c

• Add bound to TyepVar, remove type:ignore

  schroedk

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  eb1cfc8

• Add Logger class:

  Show description for 56364e2
  schroedk

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  56364e2

• Deprecate OptimieLogReader and redirect to SQLiteLogger

  schroedk

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  07ba628

• Adapt read tests for logging to new SQLiteLogger

  schroedk

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  8c88dfa

• [pre-commit.ci] auto fixes from pre-commit.com hooks

  Show description for dee344c
  pre-commit-ci[bot]

  committed
  dee344c

• Remove obsolete type cast

  schroedk

  committed
  afd0795

Commits on Aug 12, 2024

• Update environment files to include sqlalchemy-stubs

  schroedk

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  3d7f89a

• Merge remote-tracking branch 'origin/0.5.0' into refactor/logging

  schroedk

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  aadea23

Commits on Aug 13, 2024

• Move OptimizationStrategy type from logging.types to typing

  schroedk

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  0474e63

• Deprecate log_options in estimate_ml and estimate_msm, change default argument to None

  schroedk

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  79e213c

• Add functionality to handle deprecated parameter log_options

  schroedk

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  f034d2e

• Delet obsolete files

  schroedk

  committed
  ba67eaa

• Refactor logging subpackage:

  Show description for 3c2b24d
  schroedk

  committed
  3c2b24d

• Rename AbstractKeyValueStore to KeyValueStore

  schroedk

  committed
  c57edf0

• Refactor logging:

  Show description for 64082f6
  schroedk

  committed
  64082f6

• Merge remote-tracking branch 'origin/0.5.0' into refactor/logging

  schroedk

  committed
  a912d3e

• Move util functions from logging submodule to optimagic.utilities, remove obsolete submodule

  schroedk

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  164d35a

• Fix issue in handling existing database file

  schroedk

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  911dbcc

• A docstrings to dataclasses and enumerations in logging.types

  schroedk

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  a8570cd

• Rename KeyValueStore -> _KeyValueStore, add docstrings

  schroedk

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  4a83de3

• Add docstrings to Logger classes

  schroedk

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  b792592

• Add docstrings to logger.sqlalchemy submodule

  schroedk

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  7e29fe2

• Add docstrings to logger.sqlite submodule

  schroedk

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  6447d1a

• Improve argument description of fast_logging

  schroedk

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  4b005eb

• Set default argument for fast_logging to False

  schroedk

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  1f77ce8

• Import SQLiteLogger and ExistenceStrategy on top level of logging module

  schroedk

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  4796604

• Adpat how-to-guide for logging

  schroedk

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  74c61d4

• Improve ValueError message for logging types

  schroedk

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  0930bd5

• Fix issue in create_engine method, due to not overriding correctly

  schroedk

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  1449d30

• Raise warning in case table exists and if_table_exists="replace"

  schroedk

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  365ed94

• Increase test coverage

  schroedk

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  ba3a9df

• Refactor logging package:

  Show description for 3c332ce
  schroedk

  committed
  3c332ce

• Fix an issue in replacing the database file on windows, due to PermissionError

  schroedk

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  3dc7a05

• Switch order of file removal and warning in try block

  schroedk

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  1b4110d

Commits on Aug 14, 2024

• Move history return types to optimagic.typing

  schroedk

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  ce504c1

• Do not store flattened pytrees in logger stores, remove unflatten operations from reader

  schroedk

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  d98c240

• Raise ValueError instead of warning in handling og deprecated log_options

  schroedk

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  462e7a3

Commits on Aug 17, 2024

• Move metadate creation from init to cached property, due to not creating db file at init.

  schroedk

  committed
  a67035f

• Refactor logging subpackage:

  Show description for 5634837
  schroedk

  committed
  5634837

Commits on Aug 19, 2024

• Improve docstrings and type annotations

  schroedk

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  142060b

• Fix test to catch a warning

  schroedk

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  6366692

• Adapt documentation for logging

  schroedk

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  dade965

• Add reader creation from path to documentation

  schroedk

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  bfb2dcc

• Remove method 'from_path' from SQLiteLogReader, remove 'as_reader' from LogStore

  schroedk

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  d6f2c62

• Improve future warning for log options handling

  schroedk

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  620a62e

• Extend CHANGES.md

  schroedk

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  a612912

• Rename CriterionEvaluationResult -> IterationState

  schroedk

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  3668e58

• Raise FileNotFoundError for SQLiteLogReader in case no db file found

  schroedk

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  4eb9032

• Add tests for covering deprecation of log_options in minimize, maximize, estimate_ml, estimate_msm

  schroedk

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  a7d3eaa

• Add test for dprecated OptimizationLogReader

  schroedk

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  cf6f0b9

• Fix broken test

  schroedk

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  3d815fc