Repositories list

• spikeinterface

  Public
  A Python-based module for creating flexible and robust spike sorting pipelines.

  neuroscienceelectrophysiologyspike-sorting

  Python

  •

  MIT License

  •187•527•247•44•Updated Nov 11, 2024Nov 11, 2024

• spikeinterface-gui

  Public
  GUI for spikeinterface objects

  Python

  •

  MIT License

  •9•27•12•0•Updated Nov 4, 2024Nov 4, 2024

• spikeinterface-dockerfiles

  Public
  Collection of spike sorters Docker files

  Dockerfile

  •

  MIT License

  •9•8•4•3•Updated Oct 29, 2024Oct 29, 2024

• probeinterface

  Public
  Python package to handle probe layout, geometry and wiring to device.

  Python

  •

  MIT License

  •45•54•26•6•Updated Oct 24, 2024Oct 24, 2024

• spikeinterface-kilosort-reshape

  Public
  This is a friendly fork of some of kilosort4 algos

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 18, 2024Oct 18, 2024

• MEArec

  Public
  Fast and customizable of extracellular recordings on MEA

  AGS Script

  •

  GNU General Public License v3.0

  •19•42•12•1•Updated Oct 3, 2024Oct 3, 2024

• hybrid_template_library

  Public
  Library of templates to create hybrid data for spike sorting benchmarks

  Jupyter Notebook

  •

  MIT License

  •0•1•0•0•Updated Sep 29, 2024Sep 29, 2024

• probeinterface_library

  Public
  Collection of probe description for probeinterface

  Python

  •

  MIT License

  •7•9•3•1•Updated Sep 6, 2024Sep 6, 2024

• spikeinterface-pipelines

  Public
  Collection of standardized analysis pipelines based on SpikeInterface

  Python

  •

  MIT License

  •0•3•2•1•Updated Sep 3, 2024Sep 3, 2024

• SpikeInterface-Hackathon-Edinburgh-May24

  Public
  Repo for SpikeInterface Hackathon in Edinburgh - May24

  MIT License

  •1•4•18•18•Updated Jun 3, 2024Jun 3, 2024

• spikeinterface-airspeed-velocity-benchmarks

  Public
  Benchmark SpikeInterface performance with Airflow

  Python

  •

  MIT License

  •0•1•1•0•Updated May 31, 2024May 31, 2024

• SpikeInterface-Training-Edinburgh-May24

  Public
  Material for user training day of SpikeInterface

  Jupyter Notebook

  •

  MIT License

  •5•2•0•0•Updated May 29, 2024May 29, 2024

• spikeinterface-events

  Public
  Material for courses, conferences, and events about SpikeInterface

  MIT License

  •2•2•0•0•Updated May 27, 2024May 27, 2024

• spiketutorials

  Public
  Tutorials for using SpikeInterface on extracellular datasets.

  Jupyter Notebook

  •35•60•0•0•Updated Nov 7, 2023Nov 7, 2023

• ndx-probeinterface

  Public
  Extension for neural probes in the probeinterface format to NWB

  Python

  •

  MIT License

  •1•2•5•0•Updated Jul 29, 2023Jul 29, 2023

• SpikeInterface.github.io

  Public
  spikeinterface report

  Jupyter Notebook

  •

  MIT License

  •2•2•0•0•Updated Feb 22, 2023Feb 22, 2023

• spikeextractors

  Public archive
  Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.

  neuroscienceelectrophysiologyspike-sorting+ 1data-retrieval

  Python

  •

  MIT License

  •48•116•22•0•Updated Nov 22, 2022Nov 22, 2022

• spiketoolkit

  Public archive
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.

  neuroscienceelectrophysiologyspike-sorting+ 1evaluation-framework

  Python

  •

  MIT License

  •30•49•23•0•Updated Jan 14, 2022Jan 14, 2022

• spikefeatures

  Public archive
  Feature extraction library for extracellular waveforms

  Python

  •

  MIT License

  •4•1•0•0•Updated Sep 8, 2021Sep 8, 2021

• spikecomparison

  Public archive
  Python-based modules to compare and benchmark spike sorting results.

  Python

  •

  MIT License

  •8•4•2•0•Updated Sep 8, 2021Sep 8, 2021

• spikewidgets

  Public archive
  Python-based widgets for spike sorting and electrophysiology.

  visualizationneuroscienceelectrophysiology

  Python

  •

  MIT License

  •9•6•12•0•Updated Sep 8, 2021Sep 8, 2021

• spikesorters

  Public archive
  Python-based module with spike sorter wrappers and a simple API for running them.

  neuroscienceelectrophysiologyspike-sorting

  Python

  •

  MIT License

  •20•20•28•2•Updated Sep 8, 2021Sep 8, 2021

• spikemetrics

  Public archive
  Metrics for spike sorting validation/quality control

  Python

  •

  MIT License

  •13•12•1•1•Updated Sep 8, 2021Sep 8, 2021

• spikely

  Public
  A GUI for running popular spike sorting algorithms on extracellular data of any file format.

  applicationspike-sorting

  Python

  •

  GNU General Public License v3.0

  •7•16•7•0•Updated Jun 27, 2021Jun 27, 2021

• spikeresults

  Public
  A collection of notebooks with results obtained with the help of SpikeInterface

  Jupyter Notebook

  •

  MIT License

  •3•3•1•2•Updated Oct 16, 2019Oct 16, 2019