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    10 repositories

    • agmin

      Public
      A comprehensive data mining and visualization framework for tabular aging features in clinical and omics assays.
      R
      •
      Other
      •3•2•0•0•Updated May 9, 2024May 9, 2024

    • clindet

      Public
      A fully automated multi-omics data analysis pipeline based on Snakemake and singularity.
      Python
      •
      GNU General Public License v3.0
      •1•2•1•0•Updated May 4, 2024May 4, 2024

    • easyfuse

      Public
      Modified version for LDT: EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.
      Python
      •
      GNU General Public License v3.0
      •13•0•0•0•Updated Apr 10, 2024Apr 10, 2024

    • bioextr

      Public
      Extract information from text or json data.
      Go
      •
      Other
      •1•4•0•0•Updated Apr 4, 2023Apr 4, 2023

    • bget

      Public
      Portable command-line tool to query bioinformatics APIs, data, databases and files.
      databasespiderbioinformatics
      Go
      •
      Other
      •19•88•5•1•Updated Feb 23, 2023Feb 23, 2023

    • clinaml

      Public archive
      Robust prediction of the major gene expression profiling (GEP)-defined subgroups and the GEP-plus risk scores in AML.
      bioinformaticsleukemiamachine-learning
      R
      •
      Other
      •2•1•1•0•Updated Dec 10, 2022Dec 10, 2022

    • bioctl

      Public
      A simple command line tool to facilitate the data analysis.
      Go
      •
      Other
      •0•6•0•0•Updated Oct 22, 2020Oct 22, 2020

    • chromedp

      Public
      A faster, simpler way to drive browsers supporting the Chrome DevTools Protocol.
      Go
      •
      MIT License
      •788•0•0•0•Updated Oct 22, 2020Oct 22, 2020

    • rctl

      Public
      A set of command line tools based on R and JavaScript.
      workflowrngscommand-line-tool
      JavaScript
      •
      MIT License
      •3•18•0•0•Updated Apr 21, 2020Apr 21, 2020

    • anor

      Public
      anor: an annotation and visualization system based on R and Shiny framework
      rannotationsannovar
      R
      •
      Other
      •14•32•4•0•Updated Apr 20, 2020Apr 20, 2020