Skip to content
Change the repository type filter

All

    Repositories list

    • A command line interface for MOLGENIS
      CSS
      GNU Lesser General Public License v3.0
      881613Updated Dec 24, 2024Dec 24, 2024
    • MOLGENIS EMX2, the latest version of the MOLGENIS data platform.
      Vue
      GNU Lesser General Public License v3.0
      171425761Updated Dec 24, 2024Dec 24, 2024
    • Source code of the (new) website for MOLGENIS
      CSS
      GNU Lesser General Public License v3.0
      22001Updated Dec 24, 2024Dec 24, 2024
    • All things related to maintaining the RD3 database
      Python
      GNU General Public License v3.0
      3103Updated Dec 20, 2024Dec 20, 2024
    • Python
      GNU General Public License v3.0
      0100Updated Dec 19, 2024Dec 19, 2024
    • vip

      Public
      Variant Interpretation Pipeline
      Shell
      GNU Lesser General Public License v3.0
      62377Updated Dec 19, 2024Dec 19, 2024
    • Perl
      8009Updated Dec 19, 2024Dec 19, 2024
    • Shell
      GNU Lesser General Public License v3.0
      84130Updated Dec 18, 2024Dec 18, 2024
    • PICALO

      Public
      eQTL interaction optimization using expectation maximization
      Python
      BSD 3-Clause "New" or "Revised" License
      3503Updated Dec 18, 2024Dec 18, 2024
    • Shell
      GNU Lesser General Public License v3.0
      6021Updated Dec 17, 2024Dec 17, 2024
    • VIP configuration files for diagnostics
      HTML
      GNU Lesser General Public License v3.0
      0000Updated Dec 17, 2024Dec 17, 2024
    • Armadillo; a DataSHIELD implementation, part of the MOLGENIS suite
      Java
      GNU Lesser General Public License v3.0
      1077211Updated Dec 17, 2024Dec 17, 2024
    • Decision tree module for the Variant Interpretation Pipeline (vip)
      Java
      GNU Lesser General Public License v3.0
      0304Updated Dec 17, 2024Dec 17, 2024
    • eigenMT

      Public
      An Efficient Multiple-Testing Adjustment for eQTL Studies that Accounts for Linkage Disequilibrium between Variants
      Python
      9000Updated Dec 16, 2024Dec 16, 2024
    • Report template for Variant Call Format (VCF) Report generator
      TypeScript
      GNU Lesser General Public License v3.0
      0414Updated Dec 16, 2024Dec 16, 2024
    • Report API for Variant Call Format (VCF) Report templates
      TypeScript
      GNU Lesser General Public License v3.0
      0202Updated Dec 16, 2024Dec 16, 2024
    • TypeScript VCF library with support for both reading and writing
      TypeScript
      GNU Lesser General Public License v3.0
      0201Updated Dec 16, 2024Dec 16, 2024
    • Vite plugin that embeds .js and .css as base85 data
      TypeScript
      GNU Lesser General Public License v3.0
      01001Updated Dec 14, 2024Dec 14, 2024
    • Vue
      0003Updated Dec 13, 2024Dec 13, 2024
    • annotates VCF samples with denovo and possible compound flags and matching inheritance modes
      Java
      GNU Lesser General Public License v3.0
      0500Updated Dec 12, 2024Dec 12, 2024
    • Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool
      Java
      GNU General Public License v3.0
      1001724517Updated Dec 9, 2024Dec 9, 2024
    • Repository for resource files for CAPICE and updating CAPICE model
      Python
      GNU Lesser General Public License v3.0
      0180Updated Dec 9, 2024Dec 9, 2024
    • vip-web

      Public
      Variant Interpretation Pipeline web interface
      Java
      GNU Lesser General Public License v3.0
      0001Updated Dec 9, 2024Dec 9, 2024
    • straglr

      Public
      Fork of the version of the Straglr tool adapted by philres
      Python
      Other
      8011Updated Dec 9, 2024Dec 9, 2024
    • Consented admin update tool for DataSHIELD servers (Armadillo/Opal)
      Vue
      0000Updated Dec 6, 2024Dec 6, 2024
    • Frontend for eqtlgen paper
      HTML
      GNU Lesser General Public License v3.0
      4004Updated Dec 6, 2024Dec 6, 2024
    • capice

      Public
      Python
      GNU Lesser General Public License v3.0
      102381Updated Dec 5, 2024Dec 5, 2024
    • vip-utils

      Public
      Shared utils and resources for VIP modules and tools
      Java
      GNU Lesser General Public License v3.0
      0020Updated Dec 4, 2024Dec 4, 2024
    • single cell experiments in STEMI participants
      R
      0100Updated Dec 3, 2024Dec 3, 2024
    • Python
      GNU General Public License v3.0
      9800Updated Dec 2, 2024Dec 2, 2024