Repositories list

• MPiCRT-RM_stats

  Public
  R workbook for stats lectures

  Jupyter Notebook

  •0•0•0•0•Updated Nov 14, 2024Nov 14, 2024

• MPiCRT-Imaging

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Oct 11, 2024Oct 11, 2024

• MPiCRT-RM

  Public
  MPiCRT research methods

  Jupyter Notebook

  •0•1•0•0•Updated Sep 25, 2024Sep 25, 2024

• correspondence_workshop_2024

  Public
  Learning-based correspondence workshop at UdeA June 2024

  Python

  •0•3•0•0•Updated Jun 17, 2024Jun 17, 2024

• ManchesterBioinformaticsCourse_colab_student

  Public
  2023 RRR CBRP Python course, moved to colab

  Jupyter Notebook

  •1•1•0•0•Updated May 10, 2024May 10, 2024

• autosegmentation_code_for_dissertation

  Public
  Python

  •1•1•0•0•Updated Sep 6, 2023Sep 6, 2023

• Unsup-RT-Corr-Net

  Public
  Public code repository to reproduce our ShapeMI 2023 paper: "Unsupervised correspondence with combined geometric learning and imaging for radiotherapy applications"

  Python

  •

  MIT License

  •0•1•0•0•Updated Aug 25, 2023Aug 25, 2023

• auto_segmentation_starter

  Public
  Cleaned up version of some 3D auto-segmentation code

  Python

  •2•1•0•0•Updated Aug 8, 2023Aug 8, 2023

• autoseg_workshop_2023

  Public
  Jupyter Notebook

  •0•1•0•0•Updated Apr 14, 2023Apr 14, 2023

• GAAF

  Public
  Generalised Automatic Anatomy Finder (GAAF) - general framework for 3D location-finding in CT scans

  Python

  •0•4•1•0•Updated Mar 29, 2023Mar 29, 2023

• contour_auto_QATool

  Public
  Public code repository to reproduce our MICCAI 2022 paper: "Automatic identification of segmentation errors for radiotherapy using geometric learning" (ID: 1361) Pre-print: https://arxiv.org/abs/2206.13317

  Python

  •

  MIT License

  •3•11•0•0•Updated Dec 8, 2022Dec 8, 2022

• ManchesterBioinformaticsCourse_Student

  Public
  Jupyter Notebook

  •6•2•0•2•Updated Dec 8, 2022Dec 8, 2022

• CC_radiomics_project

  Public
  Python

  •0•0•0•0•Updated Apr 15, 2022Apr 15, 2022

• FLARE21

  Public
  https://flare.grand-challenge.org/FLARE21/

  Python

  •0•2•0•0•Updated Feb 7, 2022Feb 7, 2022

• Internship_sarcopenia

  Public
  A combination of work done in our MPhys project and in the internship with the Christie NHS Foundation Trust over the summer.

  machine-learningaipytorch+ 6healthcaresegmentationfcnu-netct-scanshead-and-neck-cancer

  Python

  •1•0•0•2•Updated Nov 30, 2021Nov 30, 2021

• RADAWorkshop2020

  Public
  Code and other materials for the RADA: Big Data Colombia workshop in March 2020

  Jupyter Notebook

  •0•0•0•0•Updated Oct 5, 2021Oct 5, 2021

• IBDMWorkshop

  Public
  Jupyter Notebook

  •1•1•0•0•Updated Jul 7, 2021Jul 7, 2021

• CRBPPythonCourse

  Public
  Materials for the python course run as part of the CRBP module taught in the RRR department.

  Jupyter Notebook

  •0•0•0•0•Updated Mar 13, 2020Mar 13, 2020

• tensorflow

  Public
  An Open Source Machine Learning Framework for Everyone

  C++

  •

  Apache License 2.0

  •74k•0•0•0•Updated Sep 30, 2019Sep 30, 2019

• jedi-colombia-project-complete

  Public
  Project files for the JEDI in Colombia, Feb 2019. This version is complete

  Jupyter Notebook

  •

  The Unlicense

  •1•0•0•0•Updated Feb 12, 2019Feb 12, 2019