This directory holds the source code for rust-compiled utilities.

All source code files should be directly under the src/ directory. For a source code file to be compiled, create a [[bin]] entry for it in the Cargo.toml file:

[[bin]]
name="tool0"
path="src/tool0.rs"

[[bin]]
name="othertool1"
path="src/othertool1.rs"

Note that the default package.autobins has been disabled, so that we avoid using the src/bin subdirectory to hold uncompiled source code files. The convention in the Proteinpaint project is to put bundled or compiled code under a bin/ folder, which goes against rust cargo's assumptions of having source code under src/bin.

npm run build # cargo build --release

The compiled dependencies and target binaries will be generated under ./target/release.

// assuming a js file from server/src 
const run_rust = require('@stjude/proteinpaint-rust').run_rust
// or 
// import * as utils from './utils'

// 'indel' may be replaced by any binary name as specified in Cargo.toml
const out = await run_rust('indel', input_data)

From the proteinpaint/server directory,

npx test