python2.6 incompatibility: assertIsInstance and co

[yarikoptic]

just got those

======================================================================
ERROR: test_banklist_header (pandas.io.tests.test_html.TestReadHtmlBase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/tmp/buildd/pandas-0.12.0/debian/tmp/usr/lib/python2.6/dist-packages/pandas/io/tests/test_html.py", line 387, in test_banklist_header
    self.assertTupleEqual(df.shape, ground_truth.shape)
AttributeError: 'TestReadHtmlBase' object has no attribute 'assertTupleEqual'

======================================================================
ERROR: test_banklist_no_match (pandas.io.tests.test_html.TestReadHtmlBase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/tmp/buildd/pandas-0.12.0/debian/tmp/usr/lib/python2.6/dist-packages/pandas/io/tests/test_html.py", line 164, in test_banklist_no_match
    self.assertIsInstance(df, DataFrame)
AttributeError: 'TestReadHtmlBase' object has no attribute 'assertIsInstance'

======================================================================
ERROR: test_gold_canyon (pandas.io.tests.test_html.TestReadHtmlBase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/tmp/buildd/pandas-0.12.0/debian/tmp/usr/lib/python2.6/dist-packages/pandas/io/tests/test_html.py", line 418, in test_gold_canyon
    self.assertIn(gc, df.to_string())
AttributeError: 'TestReadHtmlBase' object has no attribute 'assertIn'

there are more points where used... if python2.6 is no longer supported that is ok too ;)

[cpcloud]

weird i thought i removed those...

[cpcloud]

ahh i see thanks.

[cpcloud]

@yarikoptic can u pull down #4352 and make sure these work?

thanks!

[yarikoptic]

Thanks!

I am building (and will install) a build of cython with 2.6 support to
my buildbot and then
http://nipy.bic.berkeley.edu/builders/pandas-py2.6-wheezy-sparc
would provide the necessary check to "make sure these work" ;)

meanwhile I have uploaded 0.12.0 to *Debian without python2.6
support

Cheers

On Wed, 24 Jul 2013, Phillip Cloud wrote:

[1]@yarikoptic can u pull down [2]#4352 and make sure these work?

thanks!

—
Reply to this email directly or [3]view it on GitHub.

References

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1. https://github.com/yarikoptic
2. TST/BUG: make sure read_html tests work on python 2.6
   TST/BUG: make sure read_html tests work on python 2.6 #4352
3. python2.6 incompatibility: assertIsInstance and co #4351 (comment)

Yaroslav O. Halchenko, Ph.D.
http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org
Senior Research Associate, Psychological and Brain Sciences Dept.
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419
WWW: http://www.linkedin.com/in/yarik

[jtratner]

@yarikoptic would it be possible to have the script run python ci/versions.py (either before or after the build)? It would be helpful for debugging errors to be able to replicate the installed python packages. Also, it looks like the pandas builds are off-line and about 30 builds are queued - maybe it would make sense to cancel the earlier builds and see how many of the errors are resolved on the most recent master?

Also, are you able to set up the buildbots so that they would email me and/or other pandas core devs when they fail? It would be easier to pick up sooner.

Btw - how does the buildbot choose what to build?

[yarikoptic]

Hi @jtratner -- thanks for the buzz... apparently chroots didn't come back automagically upon reboot of that box (power outage) and I haven't mentioned that so nothing was ran for the last week... it seems that pending jobs were auto-removed in favor of the most recent revision (which is good ;) ). I will look into adding printing ci/versions.py although it would have been easier if that was also a part of the interface. E.g. in pymvpa we have mvpa2.wtf() and in statsmodels we boiled down to

    post_cmds=("python -c 'from statsmodels.tools.print_version import show_versions; show_versions()'",))

which is also great since show_versions could be called on installed systems instead of seeking for ci/versions.py among original repository -- so could ci/print_versions.py be moved within pandas api?

meanwhile -- all the versions should be close to the ones on a stock wheezy/sid installation which you can check versions for at http://packages.debian.org

And meanwhile #2 here are current printouts there
wheezy

$> ci/print_versions.py 

INSTALLED VERSIONS
------------------
Python: 2.7.3.final.0
OS: Linux 2.6.32-5-sparc64-smp #1 SMP Sun May 6 09:31:16 UTC 2012 sparc64
LC_ALL: None
LANG: None

Cython: 0.19
Numpy: 1.6.2
Scipy: 0.10.1
statsmodels: 0.4.2
    patsy: Not installed
scikits.timeseries: Not installed
dateutil: 1.5
pytz: 2012c
bottleneck: Not installed
PyTables: 2.3.1
    numexpr: 2.0.1
matplotlib: 1.1.1rc2
openpyxl: 1.5.8
xlrd: 0.6.1
xlwt: 0.7.4
sqlalchemy: Not installed
lxml: 2.3.2
bs4: 4.1.0
html5lib: 0.95-dev

sid

$> ci/print_versions.py 

INSTALLED VERSIONS
------------------
Python: 2.7.5.final.0
OS: Linux 2.6.32-5-sparc64-smp #1 SMP Sun May 6 09:31:16 UTC 2012 sparc64
LC_ALL: None
LANG: None

Cython: 0.19
Numpy: 1.7.1
Scipy: 0.10.1
statsmodels: 0.4.2
    patsy: Not installed
scikits.timeseries: Not installed
dateutil: 1.5
pytz: 2012c
bottleneck: Not installed
PyTables: 2.3.1
    numexpr: 2.0.1
matplotlib: 1.1.1rc2
openpyxl: 1.6.1
xlrd: 0.6.1
xlwt: 0.7.4
sqlalchemy: Not installed
lxml: 3.2.0
bs4: 4.2.0
html5lib: 0.95-dev

and I have just installed patsy (0.2.1-1) and sqlalchemy (0.7.8-1 in wheezy and 0.8.2-1 in sid) in those chroots

[jtratner]

@yarikoptic I'll add something to utils...would come in handy on a few of the bug reports too.

[jtratner]

@yarikoptic (meaning - I'll add a method to print versions and move ci/versions.py)

[yarikoptic]

;) good

meanwhile -- do not get surprised if current build would fail with some
obscure problems. I am updating both wheezy and sid chroots as of
speaking

On Thu, 05 Sep 2013, Jeff Tratner wrote:

[1]@yarikoptic I'll add something to utils...would come in handy on a few
of the bug reports too.

Yaroslav O. Halchenko, Ph.D.
http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org
Senior Research Associate, Psychological and Brain Sciences Dept.
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419
WWW: http://www.linkedin.com/in/yarik

[jtratner]

btw - do the buildbots send out emails when they fail? would be helpful to get notified so we could head the errors you find off early :)

[yarikoptic]

On Thu, 05 Sep 2013, Jeff Tratner wrote:

btw - do the buildbots send out emails when they fail? would be helpful to
get notified so we could head the errors you find off early :)

wouldn't it indeed? ;) email notification is not yet set up for that
buildbot ... when I get time (or @matthew-brett) -- we should
really look into that.

Yaroslav O. Halchenko, Ph.D.
http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org
Senior Research Associate, Psychological and Brain Sciences Dept.
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834 Fax: +1 (603) 646-1419
WWW: http://www.linkedin.com/in/yarik

[matthew-brett]

It's a one-liner - see the end of the nibotmi master.cfg file...