Restructured the lib files after pip install

MANIFEST.in

@@ -4,6 +4,7 @@ include CHANGELOG.rst
 include requirements.txt
 
 # If including data files in the package, add them like:
-include inputs/W_Set_PBE_test/*out
-include inputs/W_Set_PBE_molfiles/*mol
-include utilities/np_IM_test.csv
+include pomsimulator/inputs/W_Set_PBE_test/*out
+include pomsimulator/inputs/W_Set_PBE_molfiles/*mol
+include pomsimulator/utilities/np_IM_test.csv
+

setup.py

@@ -12,7 +12,7 @@
 
 
 setup(name='pomsimulator',
-      version='1.0.1a10',
+      version='1.0.1a11',
       author="Enric Petrus, Jordi Buils. Diego Garay-Ruiz",
       author_email="enricpz@icloud.com, jbuils@iciq.es, dgaray@iciq.es",
       description="Simulate the aqueous speciation of polyoxometalates (POMs) from quantum mechanical results",
@@ -26,9 +26,11 @@
                     "Operating System :: OS Independent"],
       python_requires='>=3.8',
       include_package_data=True,
-      package_data={ "inputs": [  # When adding files here, remember to update MANIFEST.in as well,
-                                  # or else they will not be included in the distribution on PyPI!
-                                  # 'path/to/data_file',
-                                  "W_Set_PBE_test/*out", "W_Set_PBE_molfiles/*mol"],
-                     "utilities": ["np_IM_test.csv"]}
-      )
+      package_data={
+        "pomsimulator": ["inputs/W_Set_PBE_test/*out",
+                         "inputs/W_Set_PBE_molfiles/*mol",
+                         "utilities/np_IM_test.csv",
+                         "outputs/",]})
+# When adding files here, remember to update MANIFEST.in as well,
+# or else they will not be included in the distribution on PyPI!
+# 'path/to/data_file',