GitHub - pgonzale60/testKal: Explore differences between Kallisto, HISAT2-featurecounts, HISAT2-stringtie. The results are benchmarked by assessing the sylamer enrichment signal. The datasets used involve miRNA abundance alterations.

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Explore differences between Kallisto, HISAT2-featurecounts, HISAT2-stringtie. The results are benchmarked by assessing the sylamer enrichment signal. The datasets used involve miRNA abundance alterations.

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This project aims to explore the differences in results between kallisto, HISAT2-stringTie and HISAT2-featureCounts. To do this, I use different datasets of altered miRNA expression. This data can also be used to explore the results of EISA.