Fixing linter issues.

phac-nml · Sep 14, 2023 · f676dfa · f676dfa
1 parent 2dbdc5f
commit f676dfa
Showing 1 changed file with 10 additions and 10 deletions.
diff --git a/tools/mykrobe_parser/mykrobe_parser.xml b/tools/mykrobe_parser/mykrobe_parser.xml
@@ -68,33 +68,33 @@
         label="Name of Run"/>
     </inputs>
     <outputs>
-        <data name="output-jsondata" from_work_dir="output-jsondata.csv" format="csv" label="jsondata"/>
-        <data name="output-report" from_work_dir="output-report.csv" format="csv" label="report"/>
+        <data name="output_jsondata" from_work_dir="output-jsondata.csv" format="csv" label="jsondata"/>
+        <data name="output_report" from_work_dir="output-report.csv" format="csv" label="report"/>
     </outputs>
     <tests>
         <test>
             <param name="input" value="prediction_2019/data/ERR031480_L6.json,prediction_2019/data/ERR125628_MBOV.json,prediction_2019/data/ERR181314_L9.json,prediction_2019/data/ERR234162_L3.json,prediction_2019/data/ERR2659153.json,prediction_2019/data/ERR266106_MCAN.json,prediction_2019/data/ERR2704812_L5.json,prediction_2019/data/ERR3335753_L1.json,prediction_2019/data/ERR4143897_MPIN.json,prediction_2019/data/ERR756348_L7.json,prediction_2019/data/ERR841495_L5.json,prediction_2019/data/SRR17089001.json,prediction_2019/data/SRR1710097_L2.json,prediction_2019/data/SRR3500411_MMUN.json,prediction_2019/data/SRR9157804.json"/>
             <param name="panel" value="2019"/>
-            <output name="output-jsondata" ftype="csv" value="prediction_2019/output-jsondata.csv"/>
-            <output name="output-report" ftype="csv" value="prediction_2019/output-report.csv"/>
+            <output name="output_jsondata" ftype="csv" value="prediction_2019/output-jsondata.csv"/>
+            <output name="output_report" ftype="csv" value="prediction_2019/output-report.csv"/>
         </test>
         <test>
             <param name="input" value="prediction_2020/data/ERR031480_L6.json,prediction_2020/data/ERR125628_MBOV.json,prediction_2020/data/ERR181314_L9.json,prediction_2020/data/ERR234162_L3.json,prediction_2020/data/ERR2659153.json,prediction_2020/data/ERR266106_MCAN.json,prediction_2020/data/ERR2704812_L5.json,prediction_2020/data/ERR3335753_L1.json,prediction_2020/data/ERR4143897_MPIN.json,prediction_2020/data/ERR756348_L7.json,prediction_2020/data/ERR841495_L5.json,prediction_2020/data/SRR17089001.json,prediction_2020/data/SRR1710097_L2.json,prediction_2020/data/SRR3500411_MMUN.json,prediction_2020/data/SRR9157804.json"/>
             <param name="panel" value="2020"/>
-            <output name="output-jsondata" ftype="csv" value="prediction_2020/output-jsondata.csv"/>
-            <output name="output-report" ftype="csv" value="prediction_2020/output-report.csv"/>
+            <output name="output_jsondata" ftype="csv" value="prediction_2020/output-jsondata.csv"/>
+            <output name="output_report" ftype="csv" value="prediction_2020/output-report.csv"/>
         </test>
         <test>
             <param name="input" value="single_2019/single2019.json"/>
             <param name="panel" value="2019"/>
-            <output name="output-jsondata" ftype="csv" value="single_2019/output-jsondata.csv"/>
-            <output name="output-report" ftype="csv" value="single_2019/output-report.csv"/>
+            <output name="output_jsondata" ftype="csv" value="single_2019/output-jsondata.csv"/>
+            <output name="output_report" ftype="csv" value="single_2019/output-report.csv"/>
         </test>
         <test>
             <param name="input" value="single_2020/single2020.json"/>
             <param name="panel" value="2020"/>
-            <output name="output-jsondata" ftype="csv" value="single_2020/output-jsondata.csv"/>
-            <output name="output-report" ftype="csv" value="single_2020/output-report.csv"/>
+            <output name="output_jsondata" ftype="csv" value="single_2020/output-jsondata.csv"/>
+            <output name="output_report" ftype="csv" value="single_2020/output-report.csv"/>
         </test>
     </tests>
     <help><![CDATA[