Switch to findDistance instead of using last=1 in findKNN. #240
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| on: | |
| push: | |
| pull_request: | |
| branches: | |
| - devel | |
| paths-ignore: | |
| - 'README.md' | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ubuntu-latest | |
| container: plger/scdblfinder:latest | |
| steps: | |
| - name: Check out repo | |
| uses: actions/checkout@v2 | |
| - name: Install latest BiocCheck | |
| run: BiocManager::install(c("BiocCheck")) | |
| shell: Rscript {0} | |
| - name: Check | |
| env: | |
| _R_CHECK_CRAN_INCOMING_REMOTE_: false | |
| run: rcmdcheck::rcmdcheck(args = "--no-manual", error_on = "error", check_dir = "check") | |
| shell: Rscript {0} | |
| - name: BiocCheck | |
| run: BiocCheck::BiocCheck(".") | |
| shell: Rscript {0} | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@master | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check | |
| - name: Show testthat output | |
| if: always() | |
| run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | |
| shell: bash |