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fix 1st line of modifications not being read
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manulera committed Nov 16, 2023
1 parent e071985 commit 14f8736
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion protein_modification_qc.py
Original file line number Diff line number Diff line change
Expand Up @@ -95,7 +95,7 @@ def check_func(row, genome, allowed_mod_dict):
with open('data/genome.pickle', 'rb') as ins:
genome = pickle.load(ins)

data = pandas.read_csv('data/pombase-chado.modifications', sep='\t', na_filter=False)
data = pandas.read_csv('data/pombase-chado.modifications', sep='\t', na_filter=False, header=None)
with open('data/allowed_mod_dict.json', 'r') as ins:
allowed_mod_dict = json.load(ins)

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