Update docs components

src/app/config/doc-config.json

@@ -55,7 +55,7 @@
       "documentation/gene-page-literature" : "Gene page: Literature",
       "documentation/gene-page-modifications" : "Gene page: Modifications",
       "documentation/gene-page-phenotypes" : "Gene page: Phenotypes",
-      "documentation/gene-page-protein-features" : "Gene page: Protein features",
+      "documentation/gene-page-protein-features" : "Gene page: Protein domains and properties",
       "documentation/gene-page-sequence" : "Gene page: Sequence",
       "documentation/gene-page-target" : "Gene page: Target of",
       "documentation/gene-page-transcript" : "Gene page: Transcript",

src/app/config/docs.json

@@ -225,8 +225,8 @@
       "id" : "documentation/gene-page-phenotypes"
    },
    {
-      "content" : "\n\nGene pages for protein-coding genes have a section describing protein features. Also see the Modifications documentation.\n\n[gene page protein features]\n\n1.  The graphical view is interactive, and shows the positions of domains and other features. Mouse over any feature to highlight its entry in the table, and to see a pop-up with the feature ID, name, nad position.\n2.  The table of protein families and domains is described in more detail below.\n3.  This section provides manual curation that ensures that large protein families (e.g. the WD family) include all known members. These manual annotations are provided because many families in protein family databases are rebuilt during the release cycle to include new sequences, and as a result gene products are sometimes lost or gained from protein families, and false negatives are common. This section is also used to capture published subfamily members which may be collected into a single family in protein family databases.\n4.  Any motifs or features annotated using Sequence Ontology (SO) terms.\n5.  Table of the protein’s physical properties\n\nProtein Families and Domains\n\n[gene page protein domains]\n\na.  Feature ID of this family or domain in the originating database. Where feasible, the ID links to the source database. Databases include Pfam, SMART, Prosite, Gene3D, SUPERFAMILY, TMHMM and Panther.\nb.  Source database name\nc.  Name of the matching feature in the contributing database\nd.  ID of the InterPro entry that includes the feature. InterPro classifies proteins into families using predictive models provided by several different databases that make up the InterPro consortium. InterPro is useful for assessing the species distribution of a particular family or domains.\ne.  The description of the domain in InterPro, from the contributing database\nf.  Start and end coordinates, showing the location of the feature within the protein\ng.  Link to a list of other fission yeast proteins which are members of the family or have the domain\nh.  Link to the InterPro entry for the feature\ni.  Link to the Pfam entry for the protein, which shows domain organization\nj.  Transmembrane domain coordinates, where applicable\n\nNote that some of the listed features (e.g. transmembrane domains from TMHMM) are predictions. Consult the contributing databases for further information, or contact the PomBase curators if you notice any problems with annotated or predicted features.\n",
-      "heading" : "Gene page: Protein features",
+      "content" : "\n\nGene pages for protein-coding genes have a section describing protein domains and properties. Also see the Modifications documentation.\n\n[gene page protein features]\n\n1.  The graphical view is interactive, and shows the positions of domains and other features. Mouse over any feature to highlight its entry in the table, and to see a pop-up with the feature ID, name, nad position.\n2.  The table of protein families and domains is described in more detail below.\n3.  This section provides manual curation that ensures that large protein families (e.g. the WD family) include all known members. These manual annotations are provided because many families in protein family databases are rebuilt during the release cycle to include new sequences, and as a result gene products are sometimes lost or gained from protein families, and false negatives are common. This section is also used to capture published subfamily members which may be collected into a single family in protein family databases.\n4.  Any motifs or features annotated using Sequence Ontology (SO) terms.\n5.  Table of the protein’s physical properties\n\nProtein Families and Domains\n\n[gene page protein domains]\n\na.  Feature ID of this family or domain in the originating database. Where feasible, the ID links to the source database. Databases include Pfam, SMART, Prosite, Gene3D, SUPERFAMILY, TMHMM and Panther.\nb.  Source database name\nc.  Name of the matching feature in the contributing database\nd.  ID of the InterPro entry that includes the feature. InterPro classifies proteins into families using predictive models provided by several different databases that make up the InterPro consortium. InterPro is useful for assessing the species distribution of a particular family or domains.\ne.  The description of the domain in InterPro, from the contributing database\nf.  Start and end coordinates, showing the location of the feature within the protein\ng.  Link to a list of other fission yeast proteins which are members of the family or have the domain\nh.  Link to the InterPro entry for the feature\ni.  Link to the Pfam entry for the protein, which shows domain organization\nj.  Transmembrane domain coordinates, where applicable\n\nNote that some of the listed features (e.g. transmembrane domains from TMHMM) are predictions. Consult the contributing databases for further information, or contact the PomBase curators if you notice any problems with annotated or predicted features.\n",
+      "heading" : "Gene page: Protein domains and properties",
       "id" : "documentation/gene-page-protein-features"
    },
    {