Include BiocStyle in Suggests

prabhakarlab · Jan 10, 2024 · 18e8f92 · 18e8f92
1 parent 0356b74
commit 18e8f92
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Showing 2 changed files with 4 additions and 9 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: Banksy
 Title: Spatial transcriptomic clustering
-Version: 0.99.5
+Version: 0.99.6
 Authors@R: c(
     person(given = "Vipul",
            family = "Singhal",
@@ -56,7 +56,8 @@ Suggests:
     harmony,
     Seurat,
     ExperimentHub,
-    spatialLIBD
+    spatialLIBD,
+    BiocStyle
 VignetteBuilder: knitr
 Config/testthat/edition: 3
 biocViews:

diff --git a/R/cluster.R b/R/cluster.R
@@ -607,13 +607,7 @@ compareClusters <-
              ),
              digits = 3) {
         if (length(func) > 1) func <- func[1]
-        func <- match.arg(
-            arg = func,
-            choices = c(
-                "ARI", "AMI", "MARI", "MARIraw", "RI",
-                "NID", "NMI", "NVI"
-            )
-        )
+        func <- match.arg(arg = func)
         measure_func <- get(func, mode = "function")
 
         clust_nm <- colnames(colData(se))