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collect columns for merge
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PSeitz committed Jan 19, 2023
1 parent 50d8a8b commit b00869c
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Showing 10 changed files with 320 additions and 21 deletions.
5 changes: 1 addition & 4 deletions bitpacker/benches/bench.rs
Original file line number Diff line number Diff line change
Expand Up @@ -6,12 +6,9 @@ extern crate test;
mod tests {
use rand::seq::IteratorRandom;
use rand::thread_rng;
use tantivy_bitpacker::BitPacker;
use tantivy_bitpacker::BitUnpacker;
use tantivy_bitpacker::BlockedBitpacker;
use tantivy_bitpacker::{BitPacker, BitUnpacker, BlockedBitpacker};
use test::Bencher;


#[inline(never)]
fn create_bitpacked_data(bit_width: u8, num_els: u32) -> Vec<u8> {
let mut bitpacker = BitPacker::new();
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19 changes: 6 additions & 13 deletions bitpacker/src/bitpacker.rs
Original file line number Diff line number Diff line change
Expand Up @@ -159,13 +159,7 @@ mod test {
use proptest::prelude::*;

fn num_bits_strategy() -> impl Strategy<Value = u8> {
prop_oneof!(
Just(0),
Just(1),
2u8..56u8,
Just(56),
Just(64),
)
prop_oneof!(Just(0), Just(1), 2u8..56u8, Just(56), Just(64),)
}

fn vals_strategy() -> impl Strategy<Value = (u8, Vec<u64>)> {
Expand All @@ -189,12 +183,11 @@ mod test {
bitpacker.flush(&mut buffer).unwrap();
assert_eq!(buffer.len(), (vals.len() * num_bits as usize + 7) / 8);
let bitunpacker = BitUnpacker::new(num_bits);
let max_val =
if num_bits == 64 {
u64::MAX
} else {
(1u64 << num_bits) - 1
};
let max_val = if num_bits == 64 {
u64::MAX
} else {
(1u64 << num_bits) - 1
};
for (i, val) in vals.iter().copied().enumerate() {
assert!(val <= max_val);
assert_eq!(bitunpacker.get(i as u32, &buffer), val);
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7 changes: 7 additions & 0 deletions columnar/src/column/mod.rs
Original file line number Diff line number Diff line change
Expand Up @@ -33,6 +33,13 @@ impl<T: PartialOrd> Column<T> {
}
}
}

pub fn min_value(&self) -> T {
self.values.min_value()
}
pub fn max_value(&self) -> T {
self.values.max_value()
}
}

impl<T: PartialOrd> Column<T> {
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7 changes: 4 additions & 3 deletions columnar/src/column_index/mod.rs
Original file line number Diff line number Diff line change
Expand Up @@ -44,9 +44,10 @@ impl<'a> ColumnIndex<'a> {
}
}
ColumnIndex::Multivalued(multivalued_index) => {
let start = multivalued_index.get_val(row_id);
let end = multivalued_index.get_val(row_id + 1);
start..end
unimplemented!()
// let start = multivalued_index.get_val(row_id);
// let end = multivalued_index.get_val(row_id + 1);
// start..end
}
}
}
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Original file line number Diff line number Diff line change
Expand Up @@ -51,6 +51,7 @@ fn test_sparse_block_set_u16_max() {
use proptest::prelude::*;

proptest! {
#![proptest_config(ProptestConfig::with_cases(1))]
#[test]
fn test_prop_test_dense(els in proptest::collection::btree_set(0..=u16::MAX, 0..=u16::MAX as usize)) {
let vals: Vec<u16> = els.into_iter().collect();
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26 changes: 26 additions & 0 deletions columnar/src/column_values/column.rs
Original file line number Diff line number Diff line change
Expand Up @@ -78,6 +78,32 @@ pub trait ColumnValues<T: PartialOrd = u64>: Send + Sync {
}
}

impl<T: Copy + PartialOrd> ColumnValues<T> for std::sync::Arc<dyn ColumnValues<T>> {
fn get_val(&self, idx: u32) -> T {
self.as_ref().get_val(idx)
}

fn min_value(&self) -> T {
self.as_ref().min_value()
}

fn max_value(&self) -> T {
self.as_ref().max_value()
}

fn num_vals(&self) -> u32 {
self.as_ref().num_vals()
}

fn iter<'b>(&'b self) -> Box<dyn Iterator<Item = T> + 'b> {
self.as_ref().iter()
}

fn get_range(&self, start: u64, output: &mut [T]) {
self.as_ref().get_range(start, output)
}
}

impl<'a, C: ColumnValues<T> + ?Sized, T: Copy + PartialOrd> ColumnValues<T> for &'a C {
fn get_val(&self, idx: u32) -> T {
(*self).get_val(idx)
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28 changes: 28 additions & 0 deletions columnar/src/columnar/column_type.rs
Original file line number Diff line number Diff line change
Expand Up @@ -28,6 +28,17 @@ impl From<NumericalType> for ColumnType {
}

impl ColumnType {
/// get column type category
pub(crate) fn column_type_category(self) -> ColumnTypeCategory {
match self {
ColumnType::I64 | ColumnType::U64 | ColumnType::F64 => ColumnTypeCategory::Numerical,
ColumnType::Bytes => ColumnTypeCategory::Bytes,
ColumnType::Str => ColumnTypeCategory::Str,
ColumnType::Bool => ColumnTypeCategory::Bool,
ColumnType::IpAddr => ColumnTypeCategory::IpAddr,
}
}

pub fn numerical_type(&self) -> Option<NumericalType> {
match self {
ColumnType::I64 => Some(NumericalType::I64),
Expand Down Expand Up @@ -57,6 +68,23 @@ impl ColumnType {
}
}

/// Column types are grouped into different categories that
/// corresponds to the different types of `JsonValue` types.
///
/// The columnar writer will apply coercion rules to make sure that
/// at most one column exist per `ColumnTypeCategory`.
///
/// See also [README.md].
#[derive(Copy, Clone, Ord, PartialOrd, Eq, PartialEq, Hash, Debug)]
#[repr(u8)]
pub enum ColumnTypeCategory {
Bool = 0u8,
Str = 1u8,
Numerical = 2u8,
IpAddr = 3u8,
Bytes = 4u8,
}

#[cfg(test)]
mod tests {
use std::collections::HashSet;
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136 changes: 136 additions & 0 deletions columnar/src/columnar/merge.rs
Original file line number Diff line number Diff line change
@@ -1,6 +1,10 @@
use std::collections::HashMap;
use std::io;

use super::column_type::ColumnTypeCategory;
use crate::columnar::ColumnarReader;
use crate::dynamic_column::{DynamicColumn, DynamicColumnHandle};
use crate::ColumnarWriter;

pub enum MergeDocOrder {
/// Columnar tables are simply stacked one above the other.
Expand Down Expand Up @@ -31,3 +35,135 @@ pub fn merge_columnar(
}
}
}

pub fn collect_columns(
columnar_readers: &[&ColumnarReader],
) -> io::Result<HashMap<String, HashMap<ColumnTypeCategory, Vec<DynamicColumn>>>> {
// Each column name may have multiple types of column associated.
// For merging we are interested in the same column type category since they can be merged.
let mut field_name_to_group: HashMap<String, HashMap<ColumnTypeCategory, Vec<DynamicColumn>>> =
HashMap::new();

for columnar_reader in columnar_readers {
let column_name_and_handle = columnar_reader.list_columns()?;
for (column_name, handle) in column_name_and_handle {
let column_type_to_handles = field_name_to_group
.entry(column_name.to_string())
.or_default();

let columns = column_type_to_handles
.entry(handle.column_type().column_type_category())
.or_default();
columns.push(handle.open()?);
}
}

normalize_columns(&mut field_name_to_group);

Ok(field_name_to_group)
}

/// Cast numerical type columns to the same type
pub(crate) fn normalize_columns(
map: &mut HashMap<String, HashMap<ColumnTypeCategory, Vec<DynamicColumn>>>,
) {
for (_field_name, type_category_to_columns) in map.iter_mut() {
for (type_category, columns) in type_category_to_columns {
if type_category == &ColumnTypeCategory::Numerical {
let casted_columns = cast_to_common_numerical_column(&columns);
*columns = casted_columns;
}
}
}
}

/// Receives a list of columns of numerical types (u64, i64, f64)
///
/// Returns a list of `DynamicColumn` which are all of the same numerical type
fn cast_to_common_numerical_column(columns: &[DynamicColumn]) -> Vec<DynamicColumn> {
assert!(columns.iter().all(|column| column.is_numerical()));
let coerce_to_i64: Vec<_> = columns
.iter()
.map(|column| column.clone().coerce_to_i64())
.collect();

if coerce_to_i64.iter().all(|column| column.is_some()) {
return coerce_to_i64
.into_iter()
.map(|column| column.unwrap())
.collect();
}

let coerce_to_u64: Vec<_> = columns
.iter()
.map(|column| column.clone().coerce_to_u64())
.collect();

if coerce_to_u64.iter().all(|column| column.is_some()) {
return coerce_to_u64
.into_iter()
.map(|column| column.unwrap())
.collect();
}

columns
.iter()
.map(|column| {
column
.clone()
.coerce_to_f64()
.expect("couldn't cast column to f64")
})
.collect()
}

#[test]
fn test_column_coercion() {
// i64 type
let columnar1 = {
let mut dataframe_writer = ColumnarWriter::default();
dataframe_writer.record_numerical(1u32, "numbers", 1i64);
let mut buffer: Vec<u8> = Vec::new();
dataframe_writer.serialize(2, &mut buffer).unwrap();
ColumnarReader::open(buffer).unwrap()
};
// u64 type
let columnar2 = {
let mut dataframe_writer = ColumnarWriter::default();
dataframe_writer.record_numerical(1u32, "numbers", u64::MAX - 100);
let mut buffer: Vec<u8> = Vec::new();
dataframe_writer.serialize(2, &mut buffer).unwrap();
ColumnarReader::open(buffer).unwrap()
};

// f64 type
let columnar3 = {
let mut dataframe_writer = ColumnarWriter::default();
dataframe_writer.record_numerical(1u32, "numbers", 30.5);
let mut buffer: Vec<u8> = Vec::new();
dataframe_writer.serialize(2, &mut buffer).unwrap();
ColumnarReader::open(buffer).unwrap()
};

let column_map = collect_columns(&[&columnar1, &columnar2, &columnar3]).unwrap();
assert_eq!(column_map.len(), 1);
let cat_to_columns = column_map.get("numbers").unwrap();
assert_eq!(cat_to_columns.len(), 1);

let numerical = cat_to_columns.get(&ColumnTypeCategory::Numerical).unwrap();
assert!(numerical.iter().all(|column| column.is_f64()));

let column_map = collect_columns(&[&columnar1, &columnar1]).unwrap();
assert_eq!(column_map.len(), 1);
let cat_to_columns = column_map.get("numbers").unwrap();
assert_eq!(cat_to_columns.len(), 1);
let numerical = cat_to_columns.get(&ColumnTypeCategory::Numerical).unwrap();
assert!(numerical.iter().all(|column| column.is_i64()));

let column_map = collect_columns(&[&columnar2, &columnar2]).unwrap();
assert_eq!(column_map.len(), 1);
let cat_to_columns = column_map.get("numbers").unwrap();
assert_eq!(cat_to_columns.len(), 1);
let numerical = cat_to_columns.get(&ColumnTypeCategory::Numerical).unwrap();
assert!(numerical.iter().all(|column| column.is_u64()));
}
2 changes: 1 addition & 1 deletion columnar/src/columnar/reader/mod.rs
Original file line number Diff line number Diff line change
Expand Up @@ -55,7 +55,7 @@ impl ColumnarReader {
.map_err(|_| io_invalid_data(format!("Unknown column code `{column_code}`")))?;
let range = stream.value().clone();
let column_name =
String::from_utf8_lossy(&key_bytes[..key_bytes.len() - 1]).to_string();
String::from_utf8_lossy(&key_bytes[..key_bytes.len() - 2]).to_string();
let file_slice = self
.column_data
.slice(range.start as usize..range.end as usize);
Expand Down
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