Lightweight Portable Message Queue Using SQLite
Temporary and permanent message queues for R. Built on top of SQLite databases. 'SQLite' provides locking, and makes it possible to detect crashed consumers. Crashed jobs can be automatically marked as "failed", or put back in the queue again, potentially a limited number of times.
Stable version:
install.packages("liteq")Development versiot:
pak::pak("r-lib/liteq")liteq implements a serverless message queue system in R.
It can handle multiple databases, and each database can contain
multiple queues.
liteq uses SQLite to store a database of queues, and uses other,
temporary SQLites databases for locking, and finding crashed workers
(see below).
library(liteq)In the following we create a queue in a temporary queue database. The database will be removed if the R session quits.
db <- tempfile()
q <- ensure_queue("jobs", db = db)
q#> liteq queue 'jobs'
list_queues(db)#> [[1]]
#> liteq queue 'jobs'
Note that ensure_queue() is idempotent, if you call it again on the same
database, it will return the queue that was created previously. So it is
safe to call it multiple times, even from multiple processes. In case of
multiple processes, the locking mechanism eliminates race conditions.
To publish a message in the queue, call publish() on the queue object:
publish(q, title = "First message", message = "Hello world!")
publish(q, title = "Second message", message = "Hello again!")
list_messages(q)#> id title status
#> 1 1 First message READY
#> 2 2 Second message READY
A liteq message has a title, which is a string scalar, and the message
body itself is a string scalar as well. To use more complex data types in
messages, you need to serialize them using the serialize() function (set
ascii to TRUE!), or convert them to JSON with the jsonlite package.
Two functions are available to consume a message from a queue.
try_consume() returns immediately, either with a message (liteq_message
object), or NULL if the queue is empty. The consume() function blocks
if the queue is empty, and waits until a message appears in it.
msg <- try_consume(q)
msg#> liteq message from queue 'jobs':
#> First message (12 B)
The title and the message body are available as fields of the message object:
msg$title#> [1] "First message"
msg$message#> [1] "Hello world!"
When a consumer is done processing a message it must call ack() on the
message object, to notify the queue that it is safe to remove the message.
If the consumer fails to process a message, it can call nack() (negative
ackowledgement) on the message object. Then the status of the message will
be set to "FAILED". Failed messages can be removed from the queue, or
put back in the queue again, depending on the application.
ack(msg)
list_messages(q)#> id title status
#> 1 2 Second message READY
msg2 <- try_consume(q)
nack(msg2)
list_messages(q)#> id title status
#> 1 2 Second message FAILED
The queue is empty now, so try_consume() returns NULL:
try_consume(q)#> NULL
If a worker crashes without calling either ack() or nack() on a message,
then this messages will be put back in the queue the next time a message is
requested from the queue.
To make this possible, each delivered message keeps an open connection to a lock file, and crashed workers are found by the absense of this open connection. In R basically means that the worker is considered as crashed if the R process has no reference to the message object.
Note, that this also means that having many workers at the same time means that it is possible to reach the maximum number of open connections by R or the operating system.
MIT © Gábor Csárdi