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@sagc-bioinformatics

SAGC - Bioinformatics

South Australian Genomics Centre

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  1. mgikit mgikit Public

    mgikit is a collection of tools used to demultiplex fastq files and generate demultiplexing and quality reports.

    Rust 11 1

  2. modules modules Public

    Module files for Nextflow workflows

    Nextflow 2 4

  3. SAGC_5mCMethylation_tutorial SAGC_5mCMethylation_tutorial Public

    WGBS tutorial

    HTML 2 4

  4. nextflow-vs-snakemake-2024 nextflow-vs-snakemake-2024 Public

    A homepage for our 2024 bioinformatics workflow managers workshop.

    HTML 2 2

  5. nextflow-example-workflow-2024 nextflow-example-workflow-2024 Public

    A complete example workflow for the 2024 nextflow-vs-snakemake workshop (https://github.com/sagc-bioinformatics/nextflow-vs-snakemake-2024)

    Nextflow 2 1

  6. nf-rnaseq-sagc nf-rnaseq-sagc Public

    RNAseq quantification pipeline

    Nextflow 1 2

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