Various Python package upgrades

[mkoeppe]

and incidental updates to the sage --package script

📝 Checklist

• The title is concise and informative.
• The description explains in detail what this PR is about.
• I have linked a relevant issue or discussion.
• I have created tests covering the changes.
• I have updated the documentation and checked the documentation preview.

⌛ Dependencies

[github-actions]

Documentation preview for this PR (built with commit 21e2a49; changes) is ready! 🎉
This preview will update shortly after each push to this PR.

[kwankyu]

LGTM.

[mkoeppe]

Thanks!

[vbraun]

Error message for exceptiongroup changed

`**********************************************************************
File "src/sage/databases/symbolic_data.py", line 184, in sage.databases.symbolic_data.SymbolicData.__getattr__
Failed example:
    sd.Cyclic5 # optional - database_symbolic_data
Expected:
    Traceback (most recent call last):
    ...
    AttributeError: No ideal matching 'Cyclic5' found in database.
Got:
    <BLANKLINE>
    Traceback (most recent call last):
      File "/var/lib/buildbot/slave/sage_git/build/src/sage/databases/symbolic_data.py", line 150, in get_ideal
        open(name)
    FileNotFoundError: [Errno 2] No such file or directory: '/var/lib/buildbot/slave/sage_git/build/local/share/symbolic_data/Data/XMLResources/INTPS/Cyclic5.xml'
    <BLANKLINE>
    During handling of the above exception, another exception occurred:
    <BLANKLINE>
    Traceback (most recent call last):
      File "/var/lib/buildbot/slave/sage_git/build/src/sage/databases/symbolic_data.py", line 154, in get_ideal
        open(name)
    FileNotFoundError: [Errno 2] No such file or directory: '/var/lib/buildbot/slave/sage_git/build/local/share/symbolic_data/Data/XMLResources/GenPS//var/lib/buildbot/slave/sage_git/build/local/share/symbolic_data/Data/XMLResources/INTPS/Cyclic5.xml.xml'
    <BLANKLINE>
    During handling of the above exception, another exception occurred:
    <BLANKLINE>
    Traceback (most recent call last):
      File "/var/lib/buildbot/slave/sage_git/build/src/sage/doctest/forker.py", line 715, in _run
        self.compile_and_execute(example, compiler, test.globs)
      File "/var/lib/buildbot/slave/sage_git/build/src/sage/doctest/forker.py", line 1147, in compile_and_execute
        exec(compiled, globs)
      File "<doctest sage.databases.symbolic_data.SymbolicData.__getattr__[1]>", line 1, in <module>
        sd.Cyclic5 # optional - database_symbolic_data
        ^^^^^^^^^^
      File "/var/lib/buildbot/slave/sage_git/build/src/sage/databases/symbolic_data.py", line 196, in __getattr__
        return self.get_ideal(name)
               ^^^^^^^^^^^^^^^^^^^^
      File "/var/lib/buildbot/slave/sage_git/build/src/sage/databases/symbolic_data.py", line 156, in get_ideal
        raise AttributeError("No ideal matching '%s' found in database." % orig_name)
    AttributeError: No ideal matching 'Cyclic5' found in database.. Did you mean: 'Cyclic_5'?
**********************************************************************
1 item had failures:
   1 of   4 in sage.databases.symbolic_data.SymbolicData.__getattr__
    [13 tests, 1 failure, 0.08 s]
----------------------------------------------------------------------
sage -t --long --random-seed=0 src/sage/databases/symbolic_data.py  # 1 doctest failed
----------------------------------------------------------------------

[mkoeppe]

What's this got to do with exceptiongroup? Sure you tested this optional package before?

[mkoeppe]

Anyway, here's a fix

[vbraun]

Yes, that optional package is on one of the buildbots

[mkoeppe]

Then what's new is probably that you're testing it with python 3.12