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Merge branch 't/30657/fix_up__sage__p_' into t/29386/install_script_p…
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…ackages_via_sage_spkg
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mkoeppe committed Sep 24, 2020
2 parents fee5bc2 + 2e20f23 commit ac09b14
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Showing 9 changed files with 138 additions and 88 deletions.
46 changes: 41 additions & 5 deletions build/bin/sage-dist-helpers
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# Shell functions for making spkg-install scripts a little easier to write,
# -*- shell-script -*- functions for making spkg-install scripts a little easier to write,
# eliminating duplication. All Sage helper functions begin with sdh_ (for
# Sage-distribution helper). Consult the below documentation for the list of
# available helper functions.
Expand Down Expand Up @@ -205,15 +205,51 @@ sdh_pip_install() {
echo "Installing $PKG_NAME"
if [ -n "$SAGE_DESTDIR" ]; then
local sudo=""
local root="--root=$SAGE_DESTDIR"
else
local sudo="$SAGE_SUDO"
local root=""
fi
$sudo sage-pip-install $root "$@" || \
sdh_die "Error installing $PKG_NAME"
$sudo sage-pip-uninstall "$@" || \
sdh_die "Error uninstalling a previous version of $PKG_NAME"

mkdir -p dist
rm -f dist/*.whl
sage-python23 -m pip wheel --wheel-dir=dist --no-binary :all: --verbose --no-deps --no-index --isolated --no-build-isolation "$@" || \
sdh_die "Error building a wheel for $PKG_NAME"

sdh_store_and_pip_install_wheel .
}

sdh_store_and_pip_install_wheel() {
if [ -n "$SAGE_DESTDIR" ]; then
local sudo=""
# --no-warn-script-location: Suppress a warning caused by --root
local root="--root=$SAGE_DESTDIR --no-warn-script-location"
else
local sudo="$SAGE_SUDO"
local root=""
fi
if [ "$*" != "." ]; then
sdh_die "Error: sdh_store_and_pip_install_wheel requires . as only argument"
fi
wheel=""
for w in dist/*.whl; do
if [ -n "$wheel" ]; then
sdh_die "Error: more than one wheel found after building"
fi
if [ -f "$w" ]; then
wheel="$w"
fi
done
if [ -z "$wheel" ]; then
sdh_die "Error: no wheel found after building"
fi

$sudo sage-pip-install $root "$wheel" || \
sdh_die "Error installing $wheel"
mkdir -p "${SAGE_DESTDIR}${SAGE_SPKG_WHEELS}" && \
$sudo mv "$wheel" "${SAGE_DESTDIR}${SAGE_SPKG_WHEELS}/" || \
sdh_die "Error storing $wheel"
}

sdh_cmake() {
echo "Configuring $PKG_NAME with cmake"
Expand Down
75 changes: 7 additions & 68 deletions build/bin/sage-pip-install
Original file line number Diff line number Diff line change
@@ -1,11 +1,6 @@
#!/usr/bin/env bash
# This command is specifically for pip-installing from a local
# source directory, as opposed to from a package index via package
# name. That is, it is for pip-installing Sage spkgs from their
# extracted upstream sources.
#
# This ensures that any previous installations of the same package
# are uninstalled first.
# This command is specifically for pip-installing a previously
# built wheel.

# Default arguments for all packages installed with `pip install`
# --ignore-installed : Force pip to re-install package even if it thinks it's
Expand All @@ -17,81 +12,25 @@
# This also disables pip's version self-check.
# --isolated : Don't read configuration files such as
# ~/.pydistutils.cfg
# --no-build-isolation:Build the package in the usual Python environment
# (containing the dependencies) instead of an
# "isolated" environment
pip_install_flags="--ignore-installed --verbose --no-deps --no-index --isolated --no-build-isolation"

# Consume any additional pip install arguments except the last one
while [ $# -gt 1 ]; do
pip_install_flags="$pip_install_flags $1"
shift
done

# Last argument must be "." and will be ignored
if [ "$1" != "." ]; then
echo >&2 "$0 requires . as final argument"
exit 1
fi

pip_install_flags="--ignore-installed --verbose --no-deps --no-index --isolated"

# Note: We need to take care to specify the full path to Sage's Python here
# to emphasize that this command hould use it, and not the system Python;
# to emphasize that this command should use it, and not the system Python;
# see https://trac.sagemath.org/ticket/18438
# But now we delegate this to sage-python23.
PYTHON=sage-python23

# The PIP variable is only used to determine the name of the lock file.
if [ "$SAGE_PYTHON3" = yes ]; then
PIP=pip3
else
PIP=pip2
fi
PIP=pip3


# Find out the name of the package that we are installing
name="$($PYTHON setup.py --name)"

if [ $? -ne 0 ]; then
echo >&2 "Error: could not determine package name"
exit 1
fi

if [ $(echo "$name" | wc -l) -gt 1 ]; then
name="$(echo "$name" | tail -1)"
echo >&2 "Warning: This package has a badly-behaved setup.py which outputs"
echo >&2 "more than the package name for 'setup.py --name'; using the last"
echo >&2 "line as the package name: $name"
fi


# We should avoid running pip2/3 while uninstalling a package because that
# We should avoid running pip while installing a package because that
# is prone to race conditions. Therefore, we use a lockfile while
# running pip. This is implemented in the Python script sage-flock
LOCK="$SAGE_LOCAL/var/lock/$PIP.lock"

# Keep uninstalling as long as it succeeds
while true; do
out=$(sage-flock -x $LOCK $PYTHON -m pip uninstall --disable-pip-version-check -y "$name" 2>&1)
if [ $? -ne 0 ]; then
# Uninstall failed
echo >&2 "$out"
exit 1
fi

# Uninstall succeeded, which may mean that the package was not
# installed to begin with.
if [[ "$out" != *"not installed" ]]; then
break
fi
done


# Finally actually do the installation (the "SHARED" tells pip2/3-lock
# to apply a shared lock)
echo "Installing package $name using $PIP"

sage-flock -s $LOCK $PYTHON -m pip install $pip_install_flags .
sage-flock -s $LOCK $PYTHON -m pip install $pip_install_flags "$@"
if [ $? -ne 0 ]; then
echo >&2 "Error: installing with $PIP failed"
exit 3
Expand Down
58 changes: 58 additions & 0 deletions build/bin/sage-pip-uninstall
Original file line number Diff line number Diff line change
@@ -0,0 +1,58 @@
#!/usr/bin/env bash
# This command ensures that any previous installations of the same package
# are uninstalled.

# Only argument must be "." and will be ignored.
if [ $# -gt 1 ]; then
echo >&2 "$0 requires . as only argument"
exit 1
fi
if [ "$1" != "." ]; then
echo >&2 "$0 requires . as final argument"
exit 1
fi

# Note: We need to take care to specify the full path to Sage's Python here
# to emphasize that this command should use it, and not the system Python;
# see https://trac.sagemath.org/ticket/18438
# But now we delegate this to sage-python23.
PYTHON=sage-python23

# The PIP variable is only used to determine the name of the lock file.
PIP=pip3

# Find out the name of the package that we are installing
name="$($PYTHON setup.py --name)"

if [ $? -ne 0 ]; then
echo >&2 "Error: could not determine package name"
exit 1
fi

if [ $(echo "$name" | wc -l) -gt 1 ]; then
name="$(echo "$name" | tail -1)"
echo >&2 "Warning: This package has a badly-behaved setup.py which outputs"
echo >&2 "more than the package name for 'setup.py --name'; using the last"
echo >&2 "line as the package name: $name"
fi

# We should avoid running pip while uninstalling a package because that
# is prone to race conditions. Therefore, we use a lockfile while
# running pip. This is implemented in the Python script sage-flock
LOCK="$SAGE_LOCAL/var/lock/$PIP.lock"

# Keep uninstalling as long as it succeeds
while true; do
out=$(sage-flock -x $LOCK $PYTHON -m pip uninstall --disable-pip-version-check -y "$name" 2>&1)
if [ $? -ne 0 ]; then
# Uninstall failed
echo >&2 "$out"
exit 1
fi

# Uninstall succeeded, which may mean that the package was not
# installed to begin with.
if [[ "$out" != *"not installed" ]]; then
break
fi
done
3 changes: 3 additions & 0 deletions build/bin/sage-spkg
Original file line number Diff line number Diff line change
Expand Up @@ -181,6 +181,9 @@ if [ -z "$SAGE_BUILD_DIR" ]; then
export SAGE_BUILD_DIR="$SAGE_LOCAL/var/tmp/sage/build"
fi

export SAGE_SPKG_INST="$SAGE_LOCAL/var/lib/sage/installed"
export SAGE_SPKG_SCRIPTS="$SAGE_LOCAL/var/lib/sage/scripts"
export SAGE_SPKG_WHEELS="$SAGE_LOCAL/var/lib/sage/wheels"

# Remove '.' from PYTHONPATH, to avoid trouble with setuptools / easy_install
# (cf. #10192, #10176):
Expand Down
1 change: 0 additions & 1 deletion build/make/install
Original file line number Diff line number Diff line change
Expand Up @@ -19,7 +19,6 @@ export SAGE_SHARE="$SAGE_LOCAL/share"
export SAGE_PKGCONFIG="$SAGE_LOCAL/lib/pkgconfig"
export SAGE_LOGS="$SAGE_ROOT/logs/pkgs"
export SAGE_SPKG_INST="$SAGE_LOCAL/var/lib/sage/installed"
export SAGE_SPKG_SCRIPTS="$SAGE_LOCAL/var/lib/sage/scripts"

if [ -z "${SAGE_ORIG_PATH_SET}" ]; then
SAGE_ORIG_PATH=$PATH && export SAGE_ORIG_PATH
Expand Down
3 changes: 2 additions & 1 deletion build/pkgs/gambit/spkg-install.in
Original file line number Diff line number Diff line change
Expand Up @@ -11,8 +11,9 @@ cd src/python
rm gambit/lib/libgambit.cpp

# pip doesn't work (https://github.com/gambitproject/gambit/issues/207)
sage-python23 setup.py --no-user-cfg build install
sage-python23 setup.py --no-user-cfg bdist_wheel
if [ $? -ne 0 ]; then
echo "Error installing Python API"
exit 1
fi
sdh_store_and_pip_install_wheel .
8 changes: 4 additions & 4 deletions build/pkgs/numpy/spkg-install.in
Original file line number Diff line number Diff line change
Expand Up @@ -23,7 +23,7 @@ export NUMPY_FCONFIG="config_fc --noopt --noarch"

sage-python23 setup.py \
--no-user-cfg \
install \
--single-version-externally-managed \
--root "$SAGE_DESTDIR" \
${NUMPY_FCONFIG} || sdh_die "Error building / installing numpy"
bdist_wheel \
${NUMPY_FCONFIG} || sdh_die "Error building wheel for numpy"

sdh_store_and_pip_install_wheel .
6 changes: 3 additions & 3 deletions build/pkgs/pillow/spkg-install.in
Original file line number Diff line number Diff line change
Expand Up @@ -24,6 +24,6 @@ sage-python23 setup.py \
--debug \
--disable-jpeg \
$extra_build_ext \
install \
--single-version-externally-managed \
--root "$SAGE_DESTDIR" || sdh_die "Error building/installing Pillow"
bdist_wheel || sdh_die "Error building/installing Pillow"

sdh_store_and_pip_install_wheel .
26 changes: 20 additions & 6 deletions src/doc/en/developer/packaging.rst
Original file line number Diff line number Diff line change
Expand Up @@ -372,12 +372,26 @@ begin with ``sdh_``, which stands for "Sage-distribution helper".
arguments. If ``$SAGE_DESTDIR`` is not set then the command is run
with ``$SAGE_SUDO``, if set.
- ``sdh_pip_install [...]``: Runs ``pip install`` with the given
arguments, as well as additional default arguments used for
installing packages into Sage with pip. Currently this is just a
wrapper around the ``sage-pip-install`` command. If
``$SAGE_DESTDIR`` is not set then the command is run with
``$SAGE_SUDO``, if set.
- ``sdh_pip_install [...]``: The equivalent of running ``pip install``
with the given arguments, as well as additional default arguments used for
installing packages into Sage with pip. The last argument must be
``.`` to indicate installation from the current directory.
``sdh_pip_install`` actually does the installation via ``pip wheel``,
creating a wheel file in ``dist/``, followed by
``sdh_store_and_pip_install_wheel`` (see below).
- ``sdh_store_and_pip_install_wheel .``: The current directory,
indicated by the required argument ``.``, must have a subdirectory
``dist`` containing a unique wheel file (``*.whl``).
This command (1) moves this wheel file to the
directory ``$SAGE_SPKG_WHEELS`` (``$SAGE_LOCAL/var/lib/sage/wheels``)
and then (2) installs the wheel in ``$SAGE_LOCAL``.
Both of these steps, instead of writing directly into ``$SAGE_LOCAL``,
use the staging directory ``$SAGE_DESTDIR`` if set; otherwise, they
use ``$SAGE_SUDO`` (if set).
- ``sdh_install [-T] SRC [SRC...] DEST``: Copies one or more files or
directories given as ``SRC`` (recursively in the case of
Expand Down

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