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Verbose stats #172

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merged 10 commits into from
Aug 17, 2015
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Dont allow verbose_stats option with -e
Add more polished R plots
Pie chart python code produces correct figures
Allow core definition to be a float
Create a core tree using fasttree
More logging
A lot more tests for different combinations of input parameters.

@sanger-pathogens sanger-pathogens locked and limited conversation to collaborators Aug 14, 2015
andrewjpage added a commit that referenced this pull request Aug 17, 2015
@andrewjpage andrewjpage merged commit 8c5fb3b into sanger-pathogens:master Aug 17, 2015
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