Tutorials

NEW: Updated Live demo using the tractography tools: https://youtu.be/A3KCekqPTok

Real-time tractography of the optic radiation using HCP data: https://www.youtube.com/watch?v=UDFpvyrXNyA

Real-time tractography and rs-fMRI tutorials: http://chamberm.github.io/fibernavigator_single.html

Video tutorials (warning: based on an earlier version of the Fibernavigator, so GUI might have changed a little)

• Intuitive 3D navigation
• Fusion of scalar volumes (T1, FA, etc.), mesh creation and interaction
• Interactive 3D visualization of tensor glyphs, ODFs and maxima (warning: starts with sound)
• Drawing tool (manual pencil and eraser) and segmentation tool
• Tractograms and fiber visualization
• Fiber statistics (mean fiber, mean value, fiber count, mean curvature, etc.) (warning: starts with sound)
• DTI/HARDI real-time fiber tractography
• DTI/HARDI real-time fiber tractography (second link) (warning: starts with sound)

Some of the preceding links take you to a specific part of the basic Fibernavigator tutorial. You can see the whole tutorial by going to this Youtube tutorial. Make sure to turn on Close Captioning (CC) to get captions that explain more details.

You can download an archive of the datasets used in the main tutorial on the SCIL's website.