Backport PR #1973: Bump version to 0.20.3 (#1974) #5063
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: scvi-tools | |
| on: | |
| push: | |
| branches: [main, 0.15.x, 0.16.x, 0.17.x, 0.18.x, 0.19.x, 0.20.x] | |
| pull_request: | |
| branches: [main, 0.15.x, 0.16.x, 0.17.x, 0.18.x, 0.19.x, 0.20.x] | |
| jobs: | |
| test: | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 20 | |
| defaults: | |
| run: | |
| shell: bash -e {0} # -e to fail on error | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python: ["3.8", "3.9", "3.10"] | |
| os: [ubuntu-latest] | |
| env: | |
| OS: ${{ matrix.os }} | |
| PYTHON: ${{ matrix.python }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Get pip cache dir | |
| id: pip-cache-dir | |
| run: | | |
| echo "::set-output name=dir::$(pip cache dir)" | |
| - name: Restore pip cache | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ steps.pip-cache-dir.outputs.dir }} | |
| key: pip-${{ runner.os }}-${{ env.pythonLocation }}-${{ hashFiles('**/pyproject.toml') }} | |
| restore-keys: | | |
| pip-${{ runner.os }}-${{ env.pythonLocation }}- | |
| - name: Install test dependencies | |
| run: | | |
| python -m pip install --upgrade pip wheel | |
| pip install codecov | |
| - name: Install dependencies | |
| run: | | |
| pip install ".[dev,pymde,autotune,hub]" | |
| - name: Test | |
| env: | |
| MPLBACKEND: agg | |
| PLATFORM: ${{ matrix.os }} | |
| DISPLAY: :42 | |
| run: | | |
| pytest -v --cov --color=yes | |
| - name: Upload coverage | |
| env: | |
| CODECOV_NAME: ${{ matrix.python }}-${{ matrix.os }} | |
| run: | | |
| codecov --required --flags=unittests |