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Revert "Autoformat all codes with black and docformatter"
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ajshajib authored Aug 21, 2023
1 parent 2d5a71f commit 5f9df03
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4 changes: 0 additions & 4 deletions Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -9,8 +9,6 @@ help:
@echo "coverage - check code coverage quickly with the default Python"
@echo "docs - generate Sphinx HTML documentation, including API docs"
@echo "sdist - package"
@echo "black - run black formatter"
@echo "docformatter - run docformatter"

clean: clean-build clean-pyc

Expand All @@ -28,8 +26,6 @@ clean-pyc:

lint:
flake8 lenstronomy test
black .
docformatter -r ./* --black --in-place

test:
py.test
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9 changes: 0 additions & 9 deletions README.rst
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Expand Up @@ -25,15 +25,6 @@
.. image:: https://img.shields.io/badge/arXiv-1803.09746%20-yellowgreen.svg
:target: https://arxiv.org/abs/1803.09746

.. image:: https://img.shields.io/badge/code%20style-black-000000.svg
:target: https://github.com/psf/black

.. image:: https://img.shields.io/badge/%20formatter-docformatter-fedcba.svg
:target: https://github.com/PyCQA/docformatter

.. image:: https://img.shields.io/badge/%20style-sphinx-0a507a.svg
:target: https://www.sphinx-doc.org/en/master/usage/index.html

..
.. image:: https://raw.githubusercontent.com/lenstronomy/lenstronomy/main/docs/figures/readme_fig.png
:target: https://raw.githubusercontent.com/lenstronomy/lenstronomy/main/docs/figures/readme_fig.png
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20 changes: 9 additions & 11 deletions docs/check_sphinx.py
Original file line number Diff line number Diff line change
@@ -1,22 +1,20 @@
"""Created on Dec 2, 2013.
'''
Created on Dec 2, 2013
@author: jakeret
"""
'''
import py
import subprocess


def test_linkcheck(tmpdir):
doctrees = tmpdir.join("doctrees")
htmldir = tmpdir.join("html")
subprocess.check_call(
["sphinx-build", "-blinkcheck", "-d", str(doctrees), ".", str(htmldir)]
)


["sphinx-build", "-blinkcheck",
"-d", str(doctrees), ".", str(htmldir)])

def test_build_docs(tmpdir):
doctrees = tmpdir.join("doctrees")
htmldir = tmpdir.join("html")
subprocess.check_call(
["sphinx-build", "-bhtml", "-d", str(doctrees), ".", str(htmldir)]
)
subprocess.check_call([
"sphinx-build", "-bhtml",
"-d", str(doctrees), ".", str(htmldir)])
142 changes: 69 additions & 73 deletions docs/conf.py
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@
# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
# sys.path.insert(0, os.path.abspath('.'))
#sys.path.insert(0, os.path.abspath('.'))

cwd = os.getcwd()
parent = os.path.dirname(cwd)
Expand All @@ -27,37 +27,33 @@
# -- General configuration -----------------------------------------------------

# If your documentation needs a minimal Sphinx version, state it here.
# needs_sphinx = '1.0'
#needs_sphinx = '1.0'

# Add any Sphinx extension module names here, as strings. They can be extensions
# coming with Sphinx (named 'sphinx.ext.*') or your custom ones.
extensions = [
"sphinx.ext.autodoc",
"sphinx.ext.coverage",
"sphinx.ext.mathjax",
"sphinx.ext.viewcode",
] # , 'sphinx.ext.autosectionlabel']
extensions = ['sphinx.ext.autodoc', 'sphinx.ext.coverage', 'sphinx.ext.mathjax', 'sphinx.ext.viewcode']\
# , 'sphinx.ext.autosectionlabel']

autodoc_default_options = {
"member-order": "bysource",
"special-members": "__init__",
'member-order': 'bysource',
'special-members': '__init__',
}

# Add any paths that contain templates here, relative to this directory.
templates_path = ["_templates"]
templates_path = ['_templates']

# The suffix of source filenames.
source_suffix = ".rst"
source_suffix = '.rst'

# The encoding of source files.
# source_encoding = 'utf-8-sig'
#source_encoding = 'utf-8-sig'

# The main toctree document.
master_doc = "index"
master_doc = 'index'

# General information about the project.
project = "lenstronomy"
copyright = "2018-2022, lenstronomy developers"
project = u'lenstronomy'
copyright = u'2018-2022, lenstronomy developers'

# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
Expand All @@ -70,23 +66,23 @@

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
# language = None
#language = None

# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
# today = ''
#today = ''
# Else, today_fmt is used as the format for a strftime call.
# today_fmt = '%B %d, %Y'
#today_fmt = '%B %d, %Y'

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
exclude_patterns = ["_build"]
exclude_patterns = ['_build']

# The reST default role (used for this markup: `text`) to use for all documents.
# default_role = None
#default_role = None

# If true, '()' will be appended to :func: etc. cross-reference text.
# add_function_parentheses = True
#add_function_parentheses = True

# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
Expand All @@ -97,141 +93,147 @@
# show_authors = False # changed from default option

# The name of the Pygments (syntax highlighting) style to use.
pygments_style = "sphinx"
pygments_style = 'sphinx'

# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []
#modindex_common_prefix = []

# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False
#keep_warnings = False


# -- Options for HTML output ---------------------------------------------------

# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
html_theme = "default"
html_theme = 'default'

# Theme options are theme-specific and customize the look and feel of a theme
# further. For a list of options available for each theme, see the
# documentation.
# html_theme_options = {}
#html_theme_options = {}

# Add any paths that contain custom themes here, relative to this directory.
# html_theme_path = []
#html_theme_path = []

# The name for this set of Sphinx documents. If None, it defaults to
# "<project> v<release> documentation".
# html_title = None
#html_title = None

# A shorter title for the navigation bar. Default is the same as html_title.
# html_short_title = None
#html_short_title = None

# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
# html_logo = None
#html_logo = None

# The name of an image file (within the static path) to use as favicon of the
# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
# html_favicon = None
#html_favicon = None

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ["_static"]
html_static_path = ['_static']

# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,
# using the given strftime format.
# html_last_updated_fmt = '%b %d, %Y'
#html_last_updated_fmt = '%b %d, %Y'

# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
# html_use_smartypants = True
#html_use_smartypants = True

# Custom sidebar templates, maps document names to template names.
# html_sidebars = {}
#html_sidebars = {}

# Additional templates that should be rendered to pages, maps page names to
# template names.
# html_additional_pages = {}
#html_additional_pages = {}

# If false, no module index is generated.
# html_domain_indices = True
#html_domain_indices = True

# If false, no index is generated.
# html_use_index = True
#html_use_index = True

# If true, the index is split into individual pages for each letter.
# html_split_index = False
#html_split_index = False

# If true, links to the reST sources are added to the pages.
# html_show_sourcelink = True
#html_show_sourcelink = True

# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
# html_show_sphinx = True
#html_show_sphinx = True

# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
html_show_copyright = True

# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
# base URL from which the finished HTML is served.
# html_use_opensearch = ''
#html_use_opensearch = ''

# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None
#html_file_suffix = None

# Output file base name for HTML help builder.
htmlhelp_basename = "lenstronomydoc"
htmlhelp_basename = 'lenstronomydoc'


# -- Options for LaTeX output --------------------------------------------------

latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
#'papersize': 'letterpaper',
# The font size ('10pt', '11pt' or '12pt').
#'pointsize': '10pt',
# Additional stuff for the LaTeX preamble.
#'preamble': '',
# The paper size ('letterpaper' or 'a4paper').
#'papersize': 'letterpaper',

# The font size ('10pt', '11pt' or '12pt').
#'pointsize': '10pt',

# Additional stuff for the LaTeX preamble.
#'preamble': '',
}

# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title, author, documentclass [howto/manual]).
latex_documents = [
("index", "lenstronomy.tex", "lenstronomy Documentation", "Simon Birrer", "manual"),
('index', 'lenstronomy.tex', u'lenstronomy Documentation',
u'Simon Birrer', 'manual'),
]

# The name of an image file (relative to this directory) to place at the top of
# the title page.
# latex_logo = None
#latex_logo = None

# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
# latex_use_parts = False
#latex_use_parts = False

# If true, show page references after internal links.
# latex_show_pagerefs = False
#latex_show_pagerefs = False

# If true, show URL addresses after external links.
# latex_show_urls = False
#latex_show_urls = False

# Documents to append as an appendix to all manuals.
# latex_appendices = []
#latex_appendices = []

# If false, no module index is generated.
# latex_domain_indices = True
#latex_domain_indices = True


# -- Options for manual page output --------------------------------------------

# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [("index", "lenstronomy", "lenstronomy Documentation", ["Simon Birrer"], 1)]
man_pages = [
('index', 'lenstronomy', u'lenstronomy Documentation',
[u'Simon Birrer'], 1)
]

# If true, show URL addresses after external links.
# man_show_urls = False
#man_show_urls = False


# -- Options for Texinfo output ------------------------------------------------
Expand All @@ -240,25 +242,19 @@
# (source start file, target name, title, author,
# dir menu entry, description, category)
texinfo_documents = [
(
"index",
"lenstronomy",
"lenstronomy Documentation",
"Simon Birrer",
"lenstronomy",
"Multi-purpose gravitational lens modeling package.",
"Miscellaneous",
),
('index', 'lenstronomy', u'lenstronomy Documentation',
u'Simon Birrer', 'lenstronomy', 'Multi-purpose gravitational lens modeling package.',
'Miscellaneous'),
]

# Documents to append as an appendix to all manuals.
# texinfo_appendices = []
#texinfo_appendices = []

# If false, no module index is generated.
# texinfo_domain_indices = True
#texinfo_domain_indices = True

# How to display URL addresses: 'footnote', 'no', or 'inline'.
# texinfo_show_urls = 'footnote'
#texinfo_show_urls = 'footnote'

# If true, do not generate a @detailmenu in the "Top" node's menu.
# texinfo_no_detailmenu = False
#texinfo_no_detailmenu = False
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