Various small tree-states fixes (#4861)

* Fix block backfill with genesis skip slots

* Fix freezer upper limit

* Fix: write post state in lcli skip-slots (#4843)

* Added CARGO_USE_GIT_CLI to the Dockerfile (#4828)

* chore: replace deprecated hub with gh for releases (#4839)

* Put schema version back to 24 (ignore Deneb)

* Minimise diff

---------

Co-authored-by: Joe Clapis <jclapis@outlook.com>
Co-authored-by: Dustin Brickwood <dustinbrickwood204@gmail.com>

.github/workflows/release.yml

@@ -282,9 +282,6 @@ jobs:
                   | <img src="https://simpleicons.org/icons/docker.svg" style="width: 32px;"/> | Docker | [${{ env.VERSION }}](https://hub.docker.com/r/${{ env.IMAGE_NAME }}/tags?page=1&ordering=last_updated&name=${{ env.VERSION }}) | [${{ env.IMAGE_NAME }}](https://hub.docker.com/r/${{ env.IMAGE_NAME }}) |
                   ENDBODY
                   )
-                  assets=()
-                  for asset in ./lighthouse-*.tar.gz*; do
-                      assets+=("-a" "$asset/$asset")
-                  done
+                  assets=(./lighthouse-*.tar.gz*)
                   tag_name="${{ env.VERSION }}"
-                  echo "$body" | hub release create --draft "${assets[@]}" -F "-" "$tag_name"
+                  echo "$body" | gh release create --draft -F "-" "$tag_name" "${assets[@]}"

Dockerfile

@@ -3,8 +3,10 @@ RUN apt-get update && apt-get -y upgrade && apt-get install -y cmake libclang-de
 COPY . lighthouse
 ARG FEATURES
 ARG PROFILE=release
+ARG CARGO_USE_GIT_CLI=false
 ENV FEATURES $FEATURES
 ENV PROFILE $PROFILE
+ENV CARGO_NET_GIT_FETCH_WITH_CLI=$CARGO_USE_GIT_CLI
 RUN cd lighthouse && make
 
 FROM ubuntu:22.04

beacon_node/beacon_chain/src/historical_blocks.rs

@@ -140,17 +140,17 @@ impl<T: BeaconChainTypes> BeaconChain<T> {
             prev_block_slot = block.slot();
             expected_block_root = block.message().parent_root();
 
-            // If we've reached genesis, add the genesis block root to the batch and set the
-            // anchor slot to 0 to indicate completion.
+            // If we've reached genesis, add the genesis block root to the batch for all slots
+            // between 0 and the first block slot, and set the anchor slot to 0 to indicate
+            // completion.
             if expected_block_root == self.genesis_block_root {
                 let genesis_slot = self.spec.genesis_slot;
-                cold_batch.push(KeyValueStoreOp::PutKeyValue(
-                    get_key_for_col(
-                        DBColumn::BeaconBlockRoots.into(),
-                        &genesis_slot.as_u64().to_be_bytes(),
-                    ),
-                    self.genesis_block_root.as_bytes().to_vec(),
-                ));
+                for slot in genesis_slot.as_u64()..block.slot().as_u64() {
+                    cold_batch.push(KeyValueStoreOp::PutKeyValue(
+                        get_key_for_col(DBColumn::BeaconBlockRoots.into(), &slot.to_be_bytes()),
+                        self.genesis_block_root.as_bytes().to_vec(),
+                    ));
+                }
                 prev_block_slot = genesis_slot;
                 expected_block_root = Hash256::zero();
                 break;

beacon_node/beacon_chain/tests/store_tests.rs

@@ -2103,6 +2103,18 @@ async fn weak_subjectivity_sync_unaligned_unadvanced_checkpoint() {
     weak_subjectivity_sync_test(slots, checkpoint_slot).await
 }
 
+// Regression test for https://github.com/sigp/lighthouse/issues/4817
+// Skip 3 slots immediately after genesis, creating a gap between the genesis block and the first
+// real block.
+#[tokio::test]
+async fn weak_subjectivity_sync_skips_at_genesis() {
+    let start_slot = 4;
+    let end_slot = E::slots_per_epoch() * 4;
+    let slots = (start_slot..end_slot).map(Slot::new).collect();
+    let checkpoint_slot = Slot::new(E::slots_per_epoch() * 2);
+    weak_subjectivity_sync_test(slots, checkpoint_slot).await
+}
+
 async fn weak_subjectivity_sync_test(slots: Vec<Slot>, checkpoint_slot: Slot) {
     // Build an initial chain on one harness, representing a synced node with full history.
     let num_final_blocks = E::slots_per_epoch() * 2;

beacon_node/store/src/forwards_iter.rs

@@ -72,8 +72,15 @@ impl<E: EthSpec, Hot: ItemStore<E>, Cold: ItemStore<E>> HotColdDB<E, Hot, Cold>
             let anchor_info = self.get_anchor_info();
             // There are no historic states stored if the state upper limit lies in the hot
             // database.  It hasn't been reached yet, and may never be.
-            if anchor_info.map_or(false, |a| a.state_upper_limit >= split_slot) {
+            if anchor_info.as_ref().map_or(false, |a| {
+                a.state_upper_limit >= split_slot && a.state_lower_limit == 0
+            }) {
                 None
+            } else if let Some(lower_limit) = anchor_info
+                .map(|a| a.state_lower_limit)
+                .filter(|limit| *limit > 0)
+            {
+                Some(lower_limit)
             } else {
                 // Otherwise if the state upper limit lies in the freezer or all states are
                 // reconstructed then state roots are available up to the split slot.

beacon_node/store/src/metadata.rs

@@ -4,7 +4,7 @@ use ssz::{Decode, Encode};
 use ssz_derive::{Decode, Encode};
 use types::{Checkpoint, Hash256, Slot};
 
-pub const CURRENT_SCHEMA_VERSION: SchemaVersion = SchemaVersion(25);
+pub const CURRENT_SCHEMA_VERSION: SchemaVersion = SchemaVersion(24);
 
 // All the keys that get stored under the `BeaconMeta` column.
 //

book/src/api-lighthouse.md

@@ -547,7 +547,6 @@ reconstruction has yet to be completed. For more information
 on the specific meanings of these fields see the docs on [Checkpoint
 Sync](./checkpoint-sync.md#reconstructing-states).
 
-
 ### `/lighthouse/merge_readiness`
 Returns the current difficulty and terminal total difficulty of the network. Before [The Merge](https://ethereum.org/en/roadmap/merge/) on 15<sup>th</sup> September 2022, you will see that the current difficulty is less than the terminal total difficulty, An example is shown below:
 ```bash

database_manager/src/lib.rs

@@ -365,8 +365,6 @@ pub fn inspect_db<E: EthSpec>(
                 } else {
                     println!("Successfully saved values to file: {:?}", file_path);
                 }
-
-                total += value.len();
             }
         }
         total += value.len();

lcli/src/skip_slots.rs

@@ -110,6 +110,7 @@ pub fn run<T: EthSpec>(
         }
         _ => return Err("must supply either --state-path or --beacon-url".into()),
     };
+    let mut post_state = None;
 
     let initial_slot = state.slot();
     let target_slot = initial_slot + slots;
@@ -141,14 +142,15 @@ pub fn run<T: EthSpec>(
 
         let duration = Instant::now().duration_since(start);
         info!("Run {}: {:?}", i, duration);
+        post_state = Some(state);
     }
 
-    if let Some(output_path) = output_path {
+    if let (Some(post_state), Some(output_path)) = (post_state, output_path) {
         let mut output_file = File::create(output_path)
             .map_err(|e| format!("Unable to create output file: {:?}", e))?;
 
         output_file
-            .write_all(&state.as_ssz_bytes())
+            .write_all(&post_state.as_ssz_bytes())
             .map_err(|e| format!("Unable to write to output file: {:?}", e))?;
     }