remove pplacer and THEN get new binary

smirarab · Nov 25, 2024 · 1e075ea · 1e075ea
1 parent 21ca11f
commit 1e075ea
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/.github/workflows/sepp_tests.yml b/.github/workflows/sepp_tests.yml
@@ -60,9 +60,9 @@ jobs:
         mkdir -p sepp-package/sepp/.sepp/ functional_tests/
         cp ./.sepp/main.config sepp-package/sepp/.sepp/main.config
         cd functional_tests
+        rm -v `find ~/ -type f -name pplacer`
         wget "https://github.com/matsen/pplacer/releases/download/v1.1.alpha17/pplacer-Linux-v1.1.alpha17.zip"
         unzip pplacer-Linux-v1.1.alpha17.zip
-        rm -v `find ~/ -type f -name pplacer`
         mv -v pplacer-Linux-v1.1.alpha17/pplacer ../sepp/.sepp/bundled-v4.5.5/pplacer
         rm -rf pplacer-Linux-v1.1.alpha17*
         ../sepp-package/run-sepp.sh ../test/unittest/data/q2-fragment-insertion/input_fragments.fasta funcTest -x 2 -a ../test/unittest/data/q2-fragment-insertion/reference_alignment_tiny.fasta -t ../test/unittest/data/q2-fragment-insertion/reference_phylogeny_tiny.nwk -r ../test/unittest/data/q2-fragment-insertion/RAxML_info-reference-gg-raxml-bl.info -b 1