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smnorris production #28

smnorris production

smnorris production #28

Workflow file for this run

name: production
run-name: ${{ github.actor }} production
on:
schedule:
- cron: '0 21 * * FRI'
workflow_dispatch:
env:
AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }}
AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
AWS_DEFAULT_REGION: ${{ secrets.AWS_DEFAULT_REGION }}
DATABASE_URL: ${{ secrets.DATABASE_URL }}
jobs:
bcfishobs:
runs-on: ubuntu-latest
environment: production
container: ghcr.io/smnorris/bcfishpass:main
steps:
- name: Checkout Repository
uses: actions/checkout@v4
- name: Run bcfishobs
run: |
mkdir -p .make
make -t .make/setup
make -t .make/load_static
make -t .make/fiss_fish_obsrvtn_pnt_sp
make --debug=basic
psql $DATABASE_URL -c "select * from bcfishobs.summary"
- name: Dump to file
run: |
ogr2ogr \
-f GPKG \
bcfishobs.gpkg \
PG:$DATABASE_URL \
-nln fiss_fish_obsrvtn_events_vw \
-sql "select fish_observation_point_id,
fish_obsrvtn_event_id,
linear_feature_id,
wscode_ltree as wscode,
localcode_ltree as localcode,
blue_line_key,
waterbody_key,
downstream_route_measure,
distance_to_stream,
match_type,
watershed_group_code,
species_id,
species_code,
agency_id,
observation_date,
agency_name,
source,
source_ref,
activity_code,
activity,
life_stage_code,
life_stage,
acat_report_url,
geom from bcfishobs.fiss_fish_obsrvtn_events_vw"
ogr2ogr \
-f GPKG \
-append \
-update \
bcfishobs.gpkg \
PG:$DATABASE_URL \
-nln fiss_fish_obsrvtn_unmatched \
-sql "select * from bcfishobs.fiss_fish_obsrvtn_unmatched"
ogr2ogr \
-f GPKG \
-append \
-update \
bcfishobs.gpkg \
PG:$DATABASE_URL \
-nln summary \
-sql "select * from bcfishobs.summary"
sozip bcfishobs.gpkg.zip bcfishobs.gpkg
aws s3 cp bcfishobs.gpkg.zip s3://bcfishpass/bcfishobs.gpkg.zip