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sokrypton committed Feb 28, 2023
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2 changes: 1 addition & 1 deletion AlphaFold2.ipynb
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Expand Up @@ -212,7 +212,7 @@
"if [ ! -f COLABFOLD_READY ]; then\n",
" # install dependencies\n",
" # We have to use \"--no-warn-conflicts\" because colab already has a lot preinstalled with requirements different to ours\n",
" pip install -q --no-warn-conflicts \"colabfold[alphafold-minus-jax] @ git+https://github.com/sokrypton/ColabFold@v1.4.0\" \"tensorflow-cpu==2.11.0\"\n",
" pip install -q --no-warn-conflicts \"colabfold[alphafold-minus-jax] @ git+https://github.com/sokrypton/ColabFold@v1.4.0\" \"tensorflow-cpu==2.7.4\"\n",
" pip uninstall -yq jax jaxlib\n",
" pip install -q \"jax[cuda]==0.3.25\" -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html\n",
" touch COLABFOLD_READY\n",
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2 changes: 1 addition & 1 deletion batch/AlphaFold2_batch.ipynb
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Expand Up @@ -119,7 +119,7 @@
"if [ ! -f COLABFOLD_READY ]; then\n",
" # install dependencies\n",
" # We have to use \"--no-warn-conflicts\" because colab already has a lot preinstalled with requirements different to ours\n",
" pip install -q --no-warn-conflicts \"colabfold[alphafold-minus-jax] @ git+https://github.com/sokrypton/ColabFold@v1.4.0\" \"tensorflow-cpu==2.11.0\"\n",
" pip install -q --no-warn-conflicts \"colabfold[alphafold-minus-jax] @ git+https://github.com/sokrypton/ColabFold@v1.4.0\" \"tensorflow-cpu==2.7.4\"\n",
" pip uninstall -yq jax jaxlib\n",
" pip install -q \"jax[cuda]==0.3.25\" -f https://storage.googleapis.com/jax-releases/jax_cuda_releases.html\n",
" touch COLABFOLD_READY\n",
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