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Add local astropy #43
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7e42901
Borrow astropy 3.0.3 recipe
jeanconn 2a28c70
Set our astropy build to definitely use numpy 1.12
jeanconn a25f5bf
Add borrowed pytest-* recipes for astropy
jeanconn 8b8d8a6
Set to build astropy (and pytest-* deps)
jeanconn ea059af
Customize astropy recipe to lock in CentOS5 pins
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This recipe is adapted from the anaconda-recipes repository. The original license was: | ||
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(c) 2016 Continuum Analytics, Inc. / http://continuum.io | ||
All Rights Reserved | ||
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Redistribution and use in source and binary forms, with or without | ||
modification, are permitted provided that the following conditions are met: | ||
* Redistributions of source code must retain the above copyright | ||
notice, this list of conditions and the following disclaimer. | ||
* Redistributions in binary form must reproduce the above copyright | ||
notice, this list of conditions and the following disclaimer in the | ||
documentation and/or other materials provided with the distribution. | ||
* Neither the name of Continuum Analytics, Inc. nor the | ||
names of its contributors may be used to endorse or promote products | ||
derived from this software without specific prior written permission. | ||
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THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND | ||
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED | ||
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE | ||
DISCLAIMED. IN NO EVENT SHALL CONTINUUM ANALYTICS BE LIABLE FOR ANY | ||
DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES | ||
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; | ||
LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND | ||
ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT | ||
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS | ||
SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. |
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if "%ARCH%"=="64" ( | ||
call "C:\Program Files (x86)\Microsoft Visual Studio 14.0\VC\vcvarsall.bat" x86_amd64 | ||
) | ||
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%PYTHON% setup.py install --offline --old-and-unmanageable | ||
if errorlevel 1 exit 1 | ||
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if "%PY3K%"=="1" ( | ||
rd /s /q %SP_DIR%\numpy | ||
) |
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#!/bin/bash | ||
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if [[ `uname` == Linux ]]; then | ||
export CFLAGS="$CFLAGS -std=c99" | ||
export CC=gcc | ||
fi | ||
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$PYTHON setup.py install --offline --old-and-unmanageable |
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{% set version = "3.0.3" %} | ||
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package: | ||
name: astropy | ||
version: {{version}} | ||
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source: | ||
fn: astropy-{{version}}.tar.gz | ||
url: https://pypi.io/packages/source/a/astropy/astropy-{{version}}.tar.gz | ||
sha256: 6af07abe5e263820a3dec93832a6ad74005013071490e125afbc6514411721da | ||
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build: | ||
detect_binary_files_with_prefix: False | ||
entry_points: | ||
- fits2bitmap = astropy.visualization.scripts.fits2bitmap:main | ||
- fitscheck = astropy.io.fits.scripts.fitscheck:main | ||
- fitsdiff = astropy.io.fits.scripts.fitsdiff:main | ||
- fitsheader = astropy.io.fits.scripts.fitsheader:main | ||
- fitsinfo = astropy.io.fits.scripts.fitsinfo:main | ||
- samp_hub = astropy.samp.hub_script:hub_script | ||
- volint = astropy.io.votable.volint:main | ||
- wcslint = astropy.wcs.wcslint:main | ||
number: 1 | ||
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requirements: | ||
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build: | ||
- python | ||
- setuptools | ||
- numpy ==1.12.1 | ||
- llvmlite ==0.18.0 | ||
- gcc ==4.8.5 [linux] | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Also, this would not build build on CentOS5 with native gcc 4.1.2 . This suggests to me that we should add a gcc/libgcc on our few other linux-64 packages. |
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- libgcc ==4.8.5 [linux] | ||
run: | ||
- python | ||
- llvmlite ==0.18.0 | ||
- numpy ==1.12.1 | ||
- pytest-astropy | ||
- libgcc ==4.8.5 [linux] | ||
test: | ||
commands: | ||
- fits2bitmap --help | ||
- fitscheck --help | ||
- fitsdiff --help | ||
- fitsheader --help | ||
- fitsinfo --help | ||
- samp_hub --help | ||
- volint --help | ||
- wcslint --help | ||
imports: | ||
- astropy | ||
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about: | ||
home: http://www.astropy.org/ | ||
license: BSD | ||
summary: Community-developed Python Library for Astronomy | ||
description: | | ||
The Astropy Project is a community effort to develop a single package for | ||
Astronomy in Python. It contains core functionality and common tools | ||
needed for performing astronomy and astrophysics research with Python. | ||
doc_url: http://docs.astropy.org/en/stable/ | ||
dev_url: https://github.com/astropy/astropy | ||
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extra: | ||
recipe-maintainers: | ||
- astrofrog-conda-forge | ||
- mwcraig | ||
- bsipocz |
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import astropy._compiler | ||
import astropy._erfa._core | ||
import astropy.convolution.boundary_extend | ||
import astropy.convolution.boundary_fill | ||
import astropy.convolution.boundary_none | ||
import astropy.convolution.boundary_wrap | ||
import astropy.cosmology.scalar_inv_efuncs | ||
import astropy.io.ascii.cparser | ||
import astropy.io.fits.compression | ||
import astropy.io.votable.tablewriter | ||
import astropy.modeling._projections | ||
import astropy.stats.lombscargle.implementations.cython_impl | ||
import astropy.table._column_mixins | ||
import astropy.table._np_utils | ||
import astropy.utils._compiler | ||
import astropy.utils.xml._iterparser | ||
import astropy.wcs._wcs | ||
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# We run a subset of the tests which are the most likely to have | ||
# issues because they rely on C extensions and bundled libraries | ||
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from astropy import test | ||
test(package='io.ascii') | ||
test(package='time') | ||
test(package='wcs') |
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{% set name = "pytest-arraydiff" %} | ||
{% set version = "0.2" %} | ||
{% set git_url = "https://github.com/astrofrog/pytest-arraydiff" %} | ||
{% set sha256 = "0145edfa8830aba07150fc09443da74d0ec4074e3de702445453415a744d3ad9" %} | ||
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package: | ||
name: {{ name|lower }} | ||
version: {{ version }} | ||
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source: | ||
fn: {{ name }}-{{ version }}.tar.gz | ||
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz | ||
sha256: {{ sha256 }} | ||
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build: | ||
noarch: python | ||
number: 0 | ||
script: python -m pip install --no-deps --ignore-installed . | ||
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requirements: | ||
build: | ||
- python | ||
- pip | ||
- pytest | ||
- numpy | ||
- six | ||
run: | ||
- python | ||
- pytest | ||
- numpy | ||
- six | ||
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test: | ||
imports: | ||
- pytest_arraydiff | ||
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about: | ||
home: {{ git_url }} | ||
license: BSD | ||
summary: 'pytest plugin to help with comparing array output from tests' | ||
description: | | ||
This is a py.test plugin to facilitate the generation and comparison of | ||
data arrays produced during tests. | ||
doc_url: {{ git_url }} | ||
dev_url: {{ git_url }} | ||
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extra: | ||
recipe-maintainers: | ||
- astrofrog-conda-forge | ||
- drdavella | ||
- mwcraig |
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{% set name = "pytest-astropy" %} | ||
{% set version = "0.4.0" %} | ||
{% set git_url = "https://github.com/astropy/pytest-astropy" %} | ||
{% set sha256 = "8eacabc025b22459bd1db7313ba8e4236918b46cba241e49b2245c8ec69a267b" %} | ||
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package: | ||
name: {{ name|lower }} | ||
version: {{ version }} | ||
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source: | ||
fn: {{ name }}-{{ version }}.tar.gz | ||
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz | ||
sha256: {{ sha256 }} | ||
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build: | ||
noarch: python | ||
number: 0 | ||
script: python -m pip install --no-deps --ignore-installed . | ||
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requirements: | ||
build: | ||
- python | ||
- pip | ||
- pytest >=3.1 | ||
- pytest-openfiles >=0.3 | ||
- pytest-remotedata >=0.3.0 | ||
- pytest-doctestplus >=0.1.3 | ||
- pytest-arraydiff >=0.1 | ||
run: | ||
- python | ||
- pytest >=3.1 | ||
- pytest-openfiles >=0.3 | ||
- pytest-remotedata >=0.3.0 | ||
- pytest-doctestplus >=0.1.3 | ||
- pytest-arraydiff >=0.1 | ||
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test: | ||
imports: | ||
- pytest_remotedata | ||
- pytest_doctestplus | ||
- pytest_openfiles | ||
- pytest_arraydiff | ||
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about: | ||
home: {{ git_url }} | ||
license: BSD | ||
summary: 'Meta-package containing dependencies for testing Astropy' | ||
description: | | ||
This is a meta-package that pulls in the dependencies that are used by | ||
astropy and some affiliated packages for testing. It can also be used for | ||
testing packages that are not affiliated with the Astropy project. | ||
doc_url: {{ git_url }} | ||
dev_url: {{ git_url }} | ||
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extra: | ||
recipe-maintainers: | ||
- astrofrog-conda-forge | ||
- drdavella | ||
- mwcraig |
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{% set name = "pytest-doctestplus" %} | ||
{% set version = "0.1.3" %} | ||
{% set git_url = "https://github.com/astropy/pytest-doctestplus" %} | ||
{% set sha256 = "91a5f81ff9e2038d363f6d49f4ec3c1b9726cc989ae8e3f227689a3793aa51fc" %} | ||
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package: | ||
name: {{ name|lower }} | ||
version: {{ version }} | ||
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source: | ||
fn: {{ name }}-{{ version }}.tar.gz | ||
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz | ||
sha256: {{ sha256 }} | ||
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build: | ||
noarch: python | ||
number: 0 | ||
script: python -m pip install --no-deps --ignore-installed . | ||
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requirements: | ||
build: | ||
- python | ||
- pip | ||
- pytest >=2.8 | ||
- six | ||
run: | ||
- python | ||
- pytest >=2.8 | ||
- six | ||
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test: | ||
imports: | ||
- pytest_doctestplus | ||
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about: | ||
home: {{ git_url }} | ||
license: BSD | ||
summary: 'Pytest plugin with advanced doctest features' | ||
description: | | ||
This package contains a plugin for the pytest framework that provides | ||
advanced doctest support and enables the testing of reStructuredText files. | ||
doc_url: {{ git_url }} | ||
dev_url: {{ git_url }} | ||
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extra: | ||
recipe-maintainers: | ||
- astrofrog-conda-forge | ||
- drdavella | ||
- mwcraig |
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{% set name = "pytest-openfiles" %} | ||
{% set version = "0.3.0" %} | ||
{% set git_url = "https://github.com/astropy/pytest-openfiles" %} | ||
{% set sha256 = "be5e6a0e7c6a64e58a27bdcdd9ab2aa09a9a9c9a525499ee08d2e77e2c19f535" %} | ||
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package: | ||
name: {{ name|lower }} | ||
version: {{ version }} | ||
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source: | ||
fn: {{ name }}-{{ version }}.tar.gz | ||
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz | ||
sha256: {{ sha256 }} | ||
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build: | ||
noarch: python | ||
number: 0 | ||
script: python -m pip install --no-deps --ignore-installed . | ||
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requirements: | ||
build: | ||
- python | ||
- pip | ||
- pytest >=3.1 | ||
- psutil | ||
run: | ||
- python | ||
- pytest >=3.1 | ||
- psutil | ||
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test: | ||
imports: | ||
- pytest_openfiles | ||
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about: | ||
home: {{ git_url }} | ||
license: BSD | ||
summary: 'Pytest plugin for detecting inadvertent open file handles' | ||
description: | | ||
This package provides a plugin for the pytest framework that allows | ||
developers to detect whether any file handles or other file-like objects | ||
were inadvertently left open at the end of a unit test. | ||
doc_url: {{ git_url }} | ||
dev_url: {{ git_url }} | ||
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extra: | ||
recipe-maintainers: | ||
- astrofrog-conda-forge | ||
- drdavella | ||
- mwcraig |
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I changed these to be very specific to our install. I think this works out so that our recipe/astropy build will be naturally deprecated when we no longer have these pins.