First level files TACAized

CONTRIBUTING.md

@@ -1,13 +1,13 @@
-#Contributing to PM code
+#Contributing to TACA code
 
 When contribution to this package please have the following things in mind:
 
-__NOTE__: _Please make sure that there are no exisiting [issues]((https://github.com/guillermo-carrasco/pm/issues)) relating to whatever you want to report._
+__NOTE__: _Please make sure that there are no exisiting [issues]((https://github.com/SciLifeLab/TACA/issues)) relating to whatever you want to report._
 
 ####To contribute:
-1. Create an issue describing the bug / suggestion / improvement / ... [here](https://github.com/guillermo-carrasco/pm/issues).
+1. Create an issue describing the bug / suggestion / improvement / ... [here](https://github.com/SciLifeLab/TACA/issues).
 2. Fork this repository to your GitHub account
-3. Make the necessary changes / additions to your forked pm repository
+3. Make the necessary changes / additions to your forked TACA repository
 4. Please *make sure* that you've documented your code and changes using [sphinx](http://sphinx.readthedocs.org/en/latest/tutorial.html) syntax, as the documentation will be automatically generated using this engine, and published to [ReadTheDocs](http://project-management.readthedocs.org/)
 5. Pull Request and wait for some responsible to review and merge the code
 

README.md

@@ -1,11 +1,11 @@
-## PM - Project Management
+## TACA - Tool for the Automation of Cleanup and Analyses
 
-[![Build Status](https://travis-ci.org/SciLifeLab/pm.svg?branch=master)](https://travis-ci.org/SciLifeLab/pm)
-[![Documentation Status](https://readthedocs.org/projects/project-management/badge/?version=latest)](https://readthedocs.org/projects/project-management/?badge=latest)
+[![Build Status](https://travis-ci.org/SciLifeLab/TACA.svg?branch=master)](https://travis-ci.org/SciLifeLab/TACA)
+[![Documentation Status](https://readthedocs.org/projects/taca/badge/?version=latest)](https://readthedocs.org/projects/taca/?badge=latest)
 
 This package contains several tools for projects and data management in the [National Genomics Infrastructure](https://portal.scilifelab.se/genomics/) in Stockholm, Sweden.
 
-For a more detailed documentation please go to [the documentation page](http://project-management.readthedocs.org/)
+For a more detailed documentation please go to [the documentation page](http://taca.readthedocs.org/en/latest/)
 
 ### Contributors
 

setup.py

@@ -9,9 +9,9 @@
 except IOError:
     install_requires = []
 
-setup(name='pm',
+setup(name='taca',
       version=version,
-      description="Project and Data management for NGI Sweden",
+      description="Tool for the Automation of Cleanup and Analyses",
       long_description='This package contains a set of functionalities that are '
                        'useful in the day-to-day tasks of bioinformatitians in '
                        'National Genomics Infrastructure in Stockholm, Sweden.',
@@ -23,6 +23,6 @@
       packages=find_packages(exclude=['ez_setup', 'examples', 'tests']),
       include_package_data=True,
       zip_safe=False,
-      scripts=['scripts/pm', 'scripts/run_tracker.py'],
+      scripts=['scripts/taca', 'scripts/run_tracker.py'],
       install_requires=install_requires
       )