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@stage-comprection

stage-comprection

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  1. pipeline pipeline Public

    Reorganized evaluation pipeline

    Python

  2. dbg_correction dbg_correction Public

    Performs correction of a read set using DB graph alignment

    C++

  3. evaluation_correction evaluation_correction Public

    Evaluates correction of a set of reads

    C++

  4. bowtie_to_reads bowtie_to_reads Public

    Tool to parse and filter SAM output from alignment software

    C++

  5. format_reads_file format_reads_file Public

    Tool to format a fasta reads file for easier use

    C++

  6. utils utils Public

    A small library of functions used in the evaluation correction pipeline

    C++

Repositories

Showing 10 of 13 repositories
  • toolbox Public

    A collection of tools used to analyse reads files

    stage-comprection/toolbox’s past year of commit activity
    C++ 0 0 0 0 Updated Mar 10, 2017
  • evaluation_v2 Public
    stage-comprection/evaluation_v2’s past year of commit activity
    C++ 0 0 0 0 Updated Jun 21, 2016
  • mutator Public

    Tool to generate mutated readsets and references

    stage-comprection/mutator’s past year of commit activity
    C++ 0 0 0 0 Updated Jun 10, 2016
  • dna_to_bin Public

    Benchmarks for DNA to binary conversion

    stage-comprection/dna_to_bin’s past year of commit activity
    C++ 0 0 0 0 Updated Apr 26, 2016
  • blat_to_reads Public
    stage-comprection/blat_to_reads’s past year of commit activity
    C++ 0 0 0 0 Updated Mar 30, 2016
  • FTL Public Forked from NadineLaCuisine/FTL

    Faster than Light !

    stage-comprection/FTL’s past year of commit activity
    C++ 0 1 0 0 Updated Mar 29, 2016
  • pipeline Public

    Reorganized evaluation pipeline

    stage-comprection/pipeline’s past year of commit activity
    Python 0 0 0 0 Updated Mar 23, 2016
  • utils Public

    A small library of functions used in the evaluation correction pipeline

    stage-comprection/utils’s past year of commit activity
    C++ 0 0 0 0 Updated Mar 23, 2016
  • evaluation_correction Public

    Evaluates correction of a set of reads

    stage-comprection/evaluation_correction’s past year of commit activity
    C++ 0 0 0 0 Updated Mar 23, 2016
  • bowtie_to_reads Public

    Tool to parse and filter SAM output from alignment software

    stage-comprection/bowtie_to_reads’s past year of commit activity
    C++ 0 0 0 0 Updated Mar 23, 2016
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