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Feature/issue 123 complex numbers with vars #789

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Feature/issue 123 complex numbers with vars #789

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Commits on Jul 25, 2018

  1. Failing test for issue 123

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  2. Updated test to use AVAR macro

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  3. Complex numbers rough first attempt

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  4. Fixed accidental reversal of tests

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  5. [Jenkins] auto-formatting by clang-format version 5.0.1 (tags/RELEASE… 

    …_501/final)
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  6. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  7. Changed restriction on stan::math::internal::complex converting ctor … 

    …to eliminate forward declaration of var or fvar. Tried to fix formatting.
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  8. [Jenkins] auto-formatting by clang-format version 5.0.1-svn319952-1~e… 

    …xp1 (branches/release_50)
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  9. Added std::complex<fvar<T>>

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  10. Changes to enable computation with Eigen

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  11. Adding complex double times var

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  12. [Jenkins] auto-formatting by clang-format version 5.0.1 (tags/RELEASE… 

    …_501/final)
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  13. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  14. fixes for fullPivLu() test case

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  15. switched to output std::complex, added hessian test, added static ass… 

    …erts for Eigen and apply_scalar_unary
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  16. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  17. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  18. removed inline from type trait value convenience booleans

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  19. tried to address cpplint issues

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  20. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  21. removed dead code and obviated comments

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  22. changed forward declaration keyword for complex to match struct decla… 

    …ration; changed is_same_v to is_same::value
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  23. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  24. Trying to change the number of template parameters specified by stan'… 

    …s specialization of Eigen's ScalarBinaryOpTraits to avoid problems on old compilers
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  25. remove leftover diff output from merge

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  26. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  27. removed compatibility attempt, added include

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  28. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  29. removed constexpr from _v template using declarations due to old GCC … 

    …compiler bugs, changed one of the fvar ctors with boost::enable_if_c as a dummy argument to use std::enable_if_t in the template parameter list... for some reason the old enable_if was failing, saying that there was no member named type...
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  30. reintroduced equality and inequality

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  31. [Jenkins] auto-formatting by clang-format version 5.0.2-svn328729-1~e… 

    …xp1~20180406212027.91 (branches/release_50)
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  32. moved enable_if into function parameter list... not sure why this fix… 

    …es the problem
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  33. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  34. removed value template variables because gcc 4.9 doesn't support them… 

    …, switched fvar copy ctor back into template because one of the tests fails with it in the ctor... I am sure that I will re-learn why I had it this way shortly when the full test battery is re-run, then I'll have to figure out a way to break the cycle
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  35. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  36. override clang's complex division, and modify fvar enable_if ctor to … 

    …not trigger void* = 0 failure
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  37. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  38. cpplint

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  39. doxygen complaint, headers complaint

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  40. duplicate symbol complaint

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  41. trying to put code in a state where others can help

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  42. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  43. switched back to clang 5 and ported my tests backs to regular cpp files

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  44. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  45. trying to use full (explicit) function template specialization to ove… 

    …rride clang's division
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  46. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  47. variable ctor restrictions

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  48. [Jenkins] auto-formatting by clang-format version 5.0.2-svn328729-1~e… 

    …xp1~20180406212027.91 (branches/release_50)
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  49. moved some operators and classes to their own namespace and tightened… 

    … some of the SFINAE logic
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  50. [Jenkins] auto-formatting by clang-format version 5.0.1 (tags/RELEASE… 

    …_501/final)
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  51. cpplint, stronger types for division override

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  52. thought I removed these static_asserts earlier

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  53. may have found a method that actually allows the overload... plus mor… 

    …e adl fixes
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  54. [Jenkins] auto-formatting by clang-format version 5.0.1 (tags/RELEASE… 

    …_501/final)
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  55. reduce derivative operations in denominator & make it squared

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  56. Initial attempt to make complex fit stan's structure and pull in upda… 

    …tes from develop
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  57. Properly hooked into the new non-deducible template argument only ver… 

    …sion complex_promote
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  58. val enable_if_t to make two ambiguous cases exclusive; is_arith_like … 

    …fixed to not always be true
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  59. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  60. trying to get val recursion scheme correct

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  61. [Jenkins] auto-formatting by clang-format version 5.0.1 (tags/RELEASE… 

    …_501/final)
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  62. fixup tests

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  63. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  64. trying to fix doxygen complaint

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  65. made test use double

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  66. bring std::sqrt into scope

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  67. bringing std::sqrt into scope

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  68. hopefully making this a regular comment will make doxygen happy

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  69. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

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  70. go home Doxygen, you're drunk

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  71. rm_zeroing doxygen, probably unrelated to Jenkins doxygen error in ot… 

    …her file
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  72. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

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  73. using a different doxygen ignore command; it is possible stan doesn't… 

    … use Doxygen's preprocessor commands for ignores
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  74. opened up copysign template some more

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  75. added GPU checks

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  76. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

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  77. Fix docs

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  78. update docs

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  79. Adds <code>matrix_gpu<\code> to the docs and moved around the flags a… 

    …nd if statements to throw to be within the if statement
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  80. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

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  81. remove 0 by 0 being accepted info from docs

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  82. cpplint error

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  83. added quotation to BOOST_LIB_ABS

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  84. split gpu checks in to separate files, fixed the header guards, added… 

    … tests for check diagonal zeros
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  85. change kernel names to is_*

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  86. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

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  87. add exp() test

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  88. add abs() test

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  89. add arg() test

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  90. add a bunch of tests 

    [ci skip]

some fail due to copysign
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  91. fix acosh_test.cpp

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  92. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  93. trying to improve complex subfunctions and bring in more flexibility … 

    …for power operations on complex types
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  94. [Jenkins] auto-formatting by clang-format version 5.0.1 (tags/RELEASE… 

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  95. forgot to add new files to scal.hpp

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  96. trying to find a definition of pow that will work on libc++

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  97. [Jenkins] auto-formatting by clang-format version 5.0.2-svn328729-1~e… 

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  98. add pseudo_eigendecomposition_test.cpp

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  99. fix frechet_lccdf test

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  100. trying to fix polar and pow... not having a very good time

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  101. [Jenkins] auto-formatting by clang-format version 5.0.2-svn328729-1~e… 

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  102. use std::pow in frechet_lpdf

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  103. [Jenkins] auto-formatting by clang-format version 5.0.2-svn328729-1~e… 

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  104. use std::pow in frechet_lcdf

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  105. use std::pow in frechet_cdf

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  106. use std::pow in weibull_lpdf

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  107. use std::pow in weibull_cdf

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  108. use std::pow in weibull_lcdf

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  109. use std::pow in weibull_lccdf

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  110. use std::pow in pareto_type_2_cdf 

    [ci skip]
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  111. use std::pow in pareto_type_2_lcdf 

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  112. also test imaginary parts are zero 

    [ci skip]
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  113. remove old var ctors taking complex, and remove the complex header, w… 

    …hich stops old clang compilers from complaining about std::polar
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  114. added more description to zeroing, and removed single level upcast th… 

    …at won't be used
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  115. removed the tests added in PR #643 regarding var(std::complex<T>&) us… 

    …ing real-only components
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  116. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

    …stable/2017-11-14)
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  117. removing test that invokes gcc 4.9's complex bug

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  118. [Jenkins] auto-formatting by clang-format version 5.0.2-svn328729-1~e… 

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  119. Disable complex exp test on gcc < 5 due to compiler bug. See comments… 

    … on PR #789. Also attempt to fix what may be a javadoc autobrief problem with rm_zeroing that causes the jenkins build to stop
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  120. fix pow() and exp() on g++-4.9

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  121. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

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  122. fix doxygen error

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  123. attempt at abs overloads

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  124. [Jenkins] auto-formatting by clang-format version 5.0.1 (tags/RELEASE… 

    …_501/final)
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  125. fix return type on abs functions (whoops)

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  126. [Jenkins] auto-formatting by clang-format version 5.0.1 (tags/RELEASE… 

    …_501/final)
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  127. changes to instantiation -- honestly forgot it *wasn't* being done th… 

    …is way
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  128. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

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  129. attempt at fixing proj on gcc

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  130. [Jenkins] auto-formatting by clang-format version 6.0.0 (tags/google/… 

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  131. attempt to feed pow the right type in operator_division

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  132. [Jenkins] auto-formatting by clang-format version 6.0.0-1ubuntu2 (tag… 

    …s/RELEASE_600/final)
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  133. trying a different approach for operator division... I think I attemp… 

    …ted this before, though
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  134. [Jenkins] auto-formatting by clang-format version 5.0.1 (tags/RELEASE… 

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  135. just a hunch about the mac push back issue

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  136. undoing change to fvar on previous commit -- which is not technically… 

    … a revert since I'm not rewriting the history
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  137. the special tightly scoped abs(complex) overloads to get around buggy… 

    … behavior in libstdc++'s complex need a hypot definition available when those same overloads are processed on clang with libc++
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  138. in rev/core.hpp, std_numeric_limits appears after std_is_inf, but wit… 

    …h the forward of the unprefixed ADL-looked-up is infinity call to the std version, numeric limits of the argument type gets checked in the template SFINAE for libc++, so this additional header in the std_is_inf is required
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Commits on Jul 26, 2018

  1. increase tolerance per discussion in PR #789 about this test

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  2. increase tolerance because of test failure, similar to the pseudo eig… 

    …endecomposition test
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  3. add using std::pow to normal_sufficient_lpdf.hpp

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