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tesselle · Apr 4, 2024 · 9566121 · 9566121
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diff --git a/CITATION.cff b/CITATION.cff
@@ -1,5 +1,5 @@
 # -----------------------------------------------------------
-# CITATION file created with {cffr} R package, v0.5.0
+# CITATION file created with {cffr} R package, v1.0.0
 # See also: https://docs.ropensci.org/cffr/
 # -----------------------------------------------------------
 
@@ -8,13 +8,13 @@ message: 'To cite package "aion" in publications use:'
 type: software
 license: GPL-3.0-or-later
 title: 'aion: Archaeological Time Series'
-version: 1.0.2
+version: 1.0.3
 doi: 10.5281/zenodo.8032278
 abstract: A toolkit for archaeological time series. This package provides a system
   of classes and methods to represent and work with archaeological time series. Dates
   are represented as "rata die" and can be converted to (virtually) any calendar defined
-  by Reingold and Dershowitz (2018) <doi:10.1017/9781107415058>. This packages offers
-  a simple API that can be used by other specialized packages.
+  by Reingold and Dershowitz (2018) <https://doi.org/10.1017/9781107415058>. This
+  packages offers a simple API that can be used by other specialized packages.
 authors:
 - family-names: Frerebeau
   given-names: Nicolas
@@ -40,14 +40,13 @@ preferred-citation:
     email: joseph.roe@iaw.unibe.ch
     orcid: https://orcid.org/0000-0002-1011-1244
     affiliation: Universität Bern
-  year: '2023'
-  location:
-    name: Pessac, France
-  notes: R package version 1.0.2
-  url: https://packages.tesselle.org/aion/
-  doi: 10.5281/zenodo.8032278
+  year: '2024'
   institution:
     name: Université Bordeaux Montaigne
+    address: Pessac, France
+  notes: R package version 1.0.3
+  url: https://packages.tesselle.org/aion/
+  doi: 10.5281/zenodo.8032278
 repository: https://CRAN.R-project.org/package=aion
 repository-code: https://github.com/tesselle/aion
 url: https://packages.tesselle.org/aion/
@@ -70,11 +69,10 @@ references:
   url: https://www.R-project.org/
   authors:
   - name: R Core Team
-  location:
-    name: Vienna, Austria
-  year: '2023'
   institution:
     name: R Foundation for Statistical Computing
+    address: Vienna, Austria
+  year: '2024'
   version: '>= 3.3'
 - type: software
   title: arkhe
@@ -88,41 +86,52 @@ references:
     email: nicolas.frerebeau@u-bordeaux-montaigne.fr
     orcid: https://orcid.org/0000-0001-5759-4944
     affiliation: Université Bordeaux Montaigne
-  year: '2023'
-  version: '>= 1.3.0'
+  year: '2024'
+  version: '>= 1.6.0'
 - type: software
   title: graphics
   abstract: 'R: A Language and Environment for Statistical Computing'
   notes: Imports
   authors:
   - name: R Core Team
-  location:
-    name: Vienna, Austria
-  year: '2023'
   institution:
     name: R Foundation for Statistical Computing
+    address: Vienna, Austria
+  year: '2024'
 - type: software
   title: grDevices
   abstract: 'R: A Language and Environment for Statistical Computing'
   notes: Imports
   authors:
   - name: R Core Team
-  location:
-    name: Vienna, Austria
-  year: '2023'
   institution:
     name: R Foundation for Statistical Computing
+    address: Vienna, Austria
+  year: '2024'
 - type: software
   title: methods
   abstract: 'R: A Language and Environment for Statistical Computing'
   notes: Imports
   authors:
   - name: R Core Team
-  location:
-    name: Vienna, Austria
-  year: '2023'
   institution:
     name: R Foundation for Statistical Computing
+    address: Vienna, Austria
+  year: '2024'
+- type: software
+  title: folio
+  abstract: 'folio: Datasets for Teaching Archaeology and Paleontology'
+  notes: Suggests
+  url: https://packages.tesselle.org/folio/
+  repository: https://CRAN.R-project.org/package=folio
+  authors:
+  - family-names: Frerebeau
+    given-names: Nicolas
+    email: nicolas.frerebeau@u-bordeaux-montaigne.fr
+    orcid: https://orcid.org/0000-0001-5759-4944
+    affiliation: Université Bordeaux Montaigne
+  year: '2024'
+  version: '>= 1.4.0'
 - type: software
   title: knitr
   abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
@@ -134,50 +143,23 @@ references:
     given-names: Yihui
     email: xie@yihui.name
     orcid: https://orcid.org/0000-0003-0645-5666
-  year: '2023'
+  year: '2024'
 - type: software
-  title: rmarkdown
-  abstract: 'rmarkdown: Dynamic Documents for R'
+  title: markdown
+  abstract: 'markdown: Render Markdown with ''commonmark'''
   notes: Suggests
-  url: https://pkgs.rstudio.com/rmarkdown/
-  repository: https://CRAN.R-project.org/package=rmarkdown
+  url: https://github.com/rstudio/markdown
+  repository: https://CRAN.R-project.org/package=markdown
   authors:
-  - family-names: Allaire
-    given-names: JJ
-    email: jj@posit.co
   - family-names: Xie
     given-names: Yihui
     email: xie@yihui.name
     orcid: https://orcid.org/0000-0003-0645-5666
-  - family-names: Dervieux
-    given-names: Christophe
-    email: cderv@posit.co
-    orcid: https://orcid.org/0000-0003-4474-2498
-  - family-names: McPherson
-    given-names: Jonathan
-    email: jonathan@posit.co
-  - family-names: Luraschi
-    given-names: Javier
-  - family-names: Ushey
-    given-names: Kevin
-    email: kevin@posit.co
-  - family-names: Atkins
-    given-names: Aron
-    email: aron@posit.co
-  - family-names: Wickham
-    given-names: Hadley
-    email: hadley@posit.co
-  - family-names: Cheng
-    given-names: Joe
-    email: joe@posit.co
-  - family-names: Chang
-    given-names: Winston
-    email: winston@posit.co
-  - family-names: Iannone
-    given-names: Richard
-    email: rich@posit.co
-    orcid: https://orcid.org/0000-0003-3925-190X
-  year: '2023'
+  - family-names: Allaire
+    given-names: JJ
+  - family-names: Horner
+    given-names: Jeffrey
+  year: '2024'
 - type: software
   title: rsvg
   abstract: 'rsvg: Render SVG Images into PDF, PNG, (Encapsulated) PostScript, or
@@ -190,7 +172,7 @@ references:
     given-names: Jeroen
     email: jeroen@berkeley.edu
     orcid: https://orcid.org/0000-0002-4035-0289
-  year: '2023'
+  year: '2024'
 - type: software
   title: svglite
   abstract: 'svglite: An ''SVG'' Graphics Device'
@@ -217,7 +199,7 @@ references:
   - family-names: Lise
     given-names: Vaudor
     email: lise.vaudor@ens-lyon.fr
-  year: '2023'
+  year: '2024'
 - type: software
   title: tinysnapshot
   abstract: 'tinysnapshot: Snapshots for Unit Tests using the ''tinytest'' Framework'
@@ -229,19 +211,20 @@ references:
     given-names: Vincent
     email: vincent.arel-bundock@umontreal.ca
     orcid: https://orcid.org/0000-0003-2042-7063
-  year: '2023'
+  year: '2024'
 - type: software
   title: tinytest
   abstract: 'tinytest: Lightweight and Feature Complete Unit Testing Framework'
   notes: Suggests
   url: https://github.com/markvanderloo/tinytest
   repository: https://CRAN.R-project.org/package=tinytest
   authors:
-  - family-names: van der Loo
+  - family-names: Loo
     given-names: Mark
+    name-particle: van der
     email: mark.vanderloo@gmail.com
     orcid: https://orcid.org/0000-0002-9807-4686
-  year: '2023'
+  year: '2024'
 identifiers:
 - description: The concept DOI.
   type: doi
@@ -255,3 +238,6 @@ identifiers:
 - description: The versioned DOI for version 1.0.2.
   type: doi
   value: 10.5281/zenodo.10046426
+- description: The Software Heritage identifier for version 1.0.2.
+  type: swh
+  value: swh:1:rel:10b21ffbf3914a6a084766e8f704388582408a6e
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: aion
 Title: Archaeological Time Series
-Version: 1.0.2.9000
+Version: 1.0.3
 Authors@R: c(
     person("Nicolas", "Frerebeau", , "nicolas.frerebeau@u-bordeaux-montaigne.fr", role = c("aut", "cre"),
            comment = c(ORCID = "0000-0001-5759-4944", affiliation = "Université Bordeaux Montaigne")),

diff --git a/NEWS.md b/NEWS.md
@@ -1,4 +1,5 @@
-# aion 1.0.2.9000
+# aion 1.0.3
+* Published in the *Journal of Open Source Software*.
 
 # aion 1.0.2
 ## Bugfixes & changes

diff --git a/R/aion-package.R b/R/aion-package.R
@@ -2,7 +2,7 @@
 #'  \tabular{ll}{
 #'   **Package:** \tab aion \cr
 #'   **Type:** \tab Package \cr
-#'   **Version:** \tab 1.0.2 \cr
+#'   **Version:** \tab 1.0.3 \cr
 #'   **License:** \tab GPL-3 \cr
 #'   **Zenodo:** \tab \doi{10.5281/zenodo.8032278} \cr
 #'  }

diff --git a/README.md b/README.md
@@ -56,20 +56,20 @@ offers a simple API that can be used by other specialized packages.
 
     To cite aion in publications use:
 
-      Frerebeau N, Roe J (2023). _aion: Archaeological Time Series_.
+      Frerebeau N, Roe J (2024). _aion: Archaeological Time Series_.
       Université Bordeaux Montaigne, Pessac, France.
       doi:10.5281/zenodo.8032278 <https://doi.org/10.5281/zenodo.8032278>,
-      R package version 1.0.2, <https://packages.tesselle.org/aion/>.
+      R package version 1.0.3, <https://packages.tesselle.org/aion/>.
 
     A BibTeX entry for LaTeX users is
 
       @Manual{,
         author = {Nicolas Frerebeau and Joe Roe},
         title = {{aion: Archaeological Time Series}},
-        year = {2023},
+        year = {2024},
         organization = {Université Bordeaux Montaigne},
         address = {Pessac, France},
-        note = {R package version 1.0.2},
+        note = {R package version 1.0.3},
         url = {https://packages.tesselle.org/aion/},
         doi = {10.5281/zenodo.8032278},
       }

diff --git a/codemeta.json b/codemeta.json
@@ -8,13 +8,13 @@
   "codeRepository": "https://github.com/tesselle/aion",
   "issueTracker": "https://github.com/tesselle/aion/issues",
   "license": "https://spdx.org/licenses/GPL-3.0",
-  "version": "1.0.2",
+  "version": "1.0.3",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",
     "url": "https://r-project.org"
   },
-  "runtimePlatform": "R version 4.3.1 (2023-06-16)",
+  "runtimePlatform": "R version 4.3.3 (2024-02-29)",
   "provider": {
     "@id": "https://cran.r-project.org",
     "@type": "Organization",
@@ -46,6 +46,16 @@
       "@id": "https://orcid.org/0000-0001-7503-8685"
     }
   ],
+  "funder": [
+    {
+      "@type": "Organization",
+      "name": "Université Bordeaux Montaigne"
+    },
+    {
+      "@type": "Organization",
+      "name": "CNRS"
+    }
+  ],
   "maintainer": [
     {
       "@type": "Person",
@@ -56,6 +66,19 @@
     }
   ],
   "softwareSuggestions": [
+    {
+      "@type": "SoftwareApplication",
+      "identifier": "folio",
+      "name": "folio",
+      "version": ">= 1.4.0",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=folio"
+    },
     {
       "@type": "SoftwareApplication",
       "identifier": "knitr",
@@ -70,15 +93,15 @@
     },
     {
       "@type": "SoftwareApplication",
-      "identifier": "rmarkdown",
-      "name": "rmarkdown",
+      "identifier": "markdown",
+      "name": "markdown",
       "provider": {
         "@id": "https://cran.r-project.org",
         "@type": "Organization",
         "name": "Comprehensive R Archive Network (CRAN)",
         "url": "https://cran.r-project.org"
       },
-      "sameAs": "https://CRAN.R-project.org/package=rmarkdown"
+      "sameAs": "https://CRAN.R-project.org/package=markdown"
     },
     {
       "@type": "SoftwareApplication",
@@ -140,7 +163,7 @@
       "@type": "SoftwareApplication",
       "identifier": "arkhe",
       "name": "arkhe",
-      "version": ">= 1.3.0",
+      "version": ">= 1.6.0",
       "provider": {
         "@id": "https://cran.r-project.org",
         "@type": "Organization",
@@ -166,11 +189,11 @@
     },
     "SystemRequirements": null
   },
-  "fileSize": "458.717KB",
+  "fileSize": "440.237KB",
   "citation": [
     {
       "@type": "SoftwareSourceCode",
-      "datePublished": "2023",
+      "datePublished": "2024",
       "author": [
         {
           "@type": "Person",
@@ -186,7 +209,7 @@
       "name": "{aion: Archaeological Time Series}",
       "identifier": "10.5281/zenodo.8032278",
       "url": "https://packages.tesselle.org/aion/",
-      "description": "R package version 1.0.2",
+      "description": "R package version 1.0.3",
       "@id": "https://doi.org/10.5281/zenodo.8032278",
       "sameAs": "https://doi.org/10.5281/zenodo.8032278"
     }

diff --git a/cran-comments.md b/cran-comments.md
@@ -1,5 +1,5 @@
 ## Test environments
-* Local R installation: R 4.3.1
+* Local R installation: R 4.3.3
 * Ubuntu (on GitHub Actions): R devel, release, oldrel
 * Windows (on GitHub Actions and win-builder): R devel, release, oldrel
 * MacOS (on GitHub Actions): R release