Please run the following command under the randomGraphGeneration directory.
python generate_random_graphs.py size_5_graph.txt 5
For graph input file format please see size_5_graph.txt.
All the outpus are saved under output/ folder
If you are using the code for research purposes, please consider citing any one of the following paper
@ARTICLE{8051102,
author={T. K. Saha and A. Katebi and W. Dhifli and M. A. Hasan},
journal={IEEE/ACM Transactions on Computational Biology and Bioinformatics},
title={Discovery of Functional Motifs from the Interface Region of Oligomeric Proteins using Frequent Subgraph Mining},
year={2018},
volume={},
number={},
pages={1-1},
keywords={Buildings;Data mining;Databases;Electronic mail;Proteins;Bio-Informatics;Frequent Subgraph Mining;Functional Motifs;Interfacial Network},
doi={10.1109/TCBB.2017.2756879},
ISSN={1545-5963},
month={},}
@InProceedings{10.1007/978-3-319-16112-9_2,
author="Saha, Tanay Kumar and Hasan, Mohammad Al",
title="Finding Network Motifs Using MCMC Sampling",
booktitle="Complex Networks VI",
year="2015",
publisher="Springer International Publishing",
address="Cham",
pages="13--24"
}