Fast lossless data compression in Go
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Nov 9, 2024 - Go
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bwt
Here are 75 public repositories matching this topic...
SeqAn's official repository.
high-performance
cpp14
indexing
simd
alignment
bwt
fasta
blast
fastq-format
bioinfomatics
suffixarray
sequence-alignments
seqan
htslib
sam-bam
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Aug 16, 2024 - C++
Compression Benchmark
benchmark
compression
gzip
zip
huffman
zlib
brotli
lz77
codec
compressor
data-compression
bwt
zstd
lz4
lzturbo
compressor-benchmark
lzma
huffman-compression-algorithm
entropy-coder
asymmetric-numeral-systems
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Aug 14, 2023 - C
libsais is a library for linear time suffix array, longest common prefix array and burrows wheeler transform construction based on induced sorting algorithm.
bwt
suffixarray
lcp
longest-common-prefix
burrows-wheeler-transform
lcp-array
suffix-array
divsufsort
sais
parallel-suffix-array
saca
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Jul 31, 2024 - C
Fast lossless data compression in C++
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Updated
Nov 10, 2024 - C++
Fast lossless data compression in Java
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Nov 5, 2024 - Java
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Mar 19, 2023 - Rust
Fast and portable delta encoding for .NET in 100% safe, managed code.
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Dec 4, 2023 - C#
Accurate, resource-frugal and deterministic DNA sequence classifier.
bioinformatics
metagenomics
viruses
bwt
bacteria
phylogeny
metagenomic-classification
burrows-wheeler-transform
k-mers
phylogenetic-compression
simplitigs
prophyle
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Nov 1, 2024 - Python
libcubwt is a library for GPU accelerated suffix array and burrows wheeler transform construction.
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Feb 8, 2024 - Cuda
msufsort parallel suffix array construction algorithm
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Nov 16, 2020 - C++
gsufsort: building suffix arrays, LCP-arrays and BWTs for string collections [AMB 2020]
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Oct 20, 2023 - C
Experimental parallel compression algorithm
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Sep 24, 2017 - C++
Electrum plugin for Bitcoin Wallet Tracker, a lightweight personal indexer for bitcoin wallets. Allows connecting Electrum to a Bitcoin Core full node backend.
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Nov 10, 2021 - Python
Burrows-Wheeler Transform and FM-index in golang
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Apr 7, 2023 - Go
BWT, FM-index and bits vector for analyzing DNA sequence data.
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Sep 12, 2017 - Rust
Generalized enhanced suffix array construction in external memory [CPM'13, AMB 2017]
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Aug 9, 2021 - C
Custom HA integration for BWT Perla devices
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Sep 6, 2024 - Python
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