High-dimensional phenotyping to define the genetic basis of cellular morphology
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Updated
Jan 24, 2023 - Jupyter Notebook
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carpenter-lab
Here are 14 public repositories matching this topic...
Scripts for processing morphological profiling data using cytominer
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Updated
Mar 24, 2020 - R
Predicting drug polypharmacology from cell morphology readouts using variational autoencoder latent space arithmetic
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Updated
Jan 24, 2022 - Jupyter Notebook
Collaboratively written manuscript discussing Ten Simple Rules for Enabling Open Science in Biomedical Research
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Jul 25, 2019 - HTML
🛠️ Use me to version control Pooled Cell Painting data and processing pipelines
pooled-screen
cell-painting
carpenter-lab
pooled-cell-painting
template-repository
in-situ-sequencing
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Updated
May 21, 2024 - Python
👩🍳 Recipe repository for image-based profiling of Pooled Cell Painting experiments
data-science
recipe
pooled-screen
cell-painting
carpenter-lab
pooled-cell-painting
in-situ-sequencing
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Updated
Jun 28, 2024 - Python
Predicting pharmacodynamic responses to cancer drugs using cell morphology
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Updated
Oct 19, 2024 - Jupyter Notebook
Script to parse a Phenix metadata XML file and generate a .CSV for CellProfiler's loaddata module
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Updated
Nov 4, 2024 - Python
Predicting Cell Health with Morphological Profiles
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Updated
Jan 26, 2022 - HTML
Python package for processing image-based profiling data
python
image-processing
cellprofiler
microscopy
carpenter-lab
morphological-profiling
cytominer
way-lab
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Updated
Nov 6, 2024 - Python
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