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image-based-profiling

Here are 5 public repositories matching this topic...

cytodata / single-cell-classifier

Software to classify biological phenotypes from single-cell image-based morphology profiles

machine-learning morphology image-classification mechanism-of-action image-based-profiling

Updated Feb 12, 2020
HTML

broadinstitute / cell-painting-vae

Predicting drug polypharmacology from cell morphology readouts using variational autoencoder latent space arithmetic

vae cell-painting carpenter-lab image-based-profiling way-lab drug-polypharmacology

Updated Jan 24, 2022
Jupyter Notebook

marx-alex / deep-map

Implementation of DEEP-MAP (see reference)

deep-learning morphological-profiling image-based-profiling

Updated Jan 14, 2022
Python

marx-alex / Morphelia

Exploratory data analysis for image-based morphological profiling

exploratory-data-analysis microscopy time-series-analysis morphodynamics morphological-profiling image-based-profiling

Updated Mar 30, 2024
Python

marx-alex / SCALEX-mp

Batch integration for morphological profiling using variational inference

variational-inference variational-autoencoder morphological-profiling image-based-profiling

Updated Jul 17, 2023
Jupyter Notebook

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