This project builds and validates a CDI risk assessment model based on UCSF inpatient data
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Apr 21, 2022 - R
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cdiff
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Tool to find mge (phages, plasmids, and transposons) in cdiff. Scripts that allow Clostyper to be run in slurm.
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Jul 31, 2023 - Python
Typing of Clostridioides difficile isolates using NGS data (reads and contigs) based on tandem repeat loci (TR6, TR10), and toxin genes (cdtA, cdtB, tcdA, tcdB, tcdC).
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Nov 1, 2024 - ASP.NET
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