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copy-number

Here are 3 public repositories matching this topic...

polyactis / Accucopy

Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data.

somatic-variants cancer-genomics expectation-maximization gaussian-mixture-models maximum-likelihood-estimation copy-number bayesian-information-criterion auto-correlation

Updated Mar 6, 2024
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samabs / conliga

Probabilistic inference of somatic copy number alterations using repeat DNA (FAST-SeqS)

r genomics bayesian-methods bayesian-inference mcmc probabilistic-graphical-models copy-number-variation rcpparmadillo bayesian-nonparametric-models probabilistic-models copy-number

Updated Oct 13, 2018
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TNTurnerLab / CNPI

Software for Rapid Analyses of Human Copy Number Data

bioinformatics genomics genome copy-number-variation genotype karyotype copy-number x-chromosome y-chromosome autosome

Updated Nov 30, 2024
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