Set of high throughput sequencing analysis scripts to quickly generate and queue jobs on SLURM-based HPC clusters.
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Jan 22, 2021 - Shell
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crispr-screens-pipeline
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Counts barcodes within next generation sequencing data. DNA encoded libraries (DEL), CRISPR, and barcode-seq
next-generation-sequencing bioinformatics-pipeline barcode-sequencing crispr-screens-pipeline dna-econded-library
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Sep 26, 2023 - Rust
Counts barcodes within next generation sequencing data. DNA encoded libraries (DEL), CRISPR, and barcode-seq
next-generation-sequencing bioinformatics-pipeline barcode-sequencing crispr-screens-pipeline dna-encoded-library
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Nov 24, 2021 - C++
Pipeline for CRISPR-Cas9 screen analysis
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Jul 26, 2021 - Python
CRISPR Analysis
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Jul 29, 2020 - Python
CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens. Implemented as R shiny app.
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Apr 11, 2017 - HTML
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