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hi-c

Here are 5 public repositories matching this topic...

nf-core / hic

Analysis of Chromosome Conformation Capture data (Hi-C)

workflow pipeline nextflow hi-c chromosome-conformation-capture nf-core

Updated Oct 11, 2024
Nextflow

Plant-Food-Research-Open / assemblyqc

A Nextflow pipeline for evaluating assembly quality

quality-control statistics genome taxonomy assembly repeat hi-c report k-mer synteny adaptor fcs contamination phasing busco telomere n50 merqury

Updated Nov 5, 2024
Nextflow

dhslab / nf-core-hic

Pipeline for Hi-C data analysis

workflow pipeline nextflow hi-c capture-c

Updated Sep 1, 2023
Nextflow

groupnextflow

gavinf97 / groupnextflow

Hi-C Nextflow script and Singularity container for a collaborative group MSc project.

pipeline nextflow containers singularity hi-c

Updated Sep 6, 2021
Nextflow

cmdoret / vapormap

Cloud based pipeline for parallelized iterative alignment of Hi-C data

genomics nextflow hi-c aws-batch

Updated Sep 25, 2020
Nextflow

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