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htseq-count

Here are 2 public repositories matching this topic...

hanielcedraz / BAQCOM

Quality Control, Mapping and Reads Count for RNA-Seq Analysis

bioinformatics quality-control mapping bioinformatics-pipeline multiqc star hisat2 rna-seq-analysis featurecounts rna-seq-mapping fastqc rna-seq-pipeline htseq-count rna-seq-qc rnaseqpipeline trimmomatic rna-seq-aligner

Updated Mar 29, 2022
R

Manninm / MiKTMCSnakemakePipeline

Attempt at snakemake pipeline. Pyflow was forked from https://github.com/crazyhottom but the Snakefile infrastructure and rule calling was inspired by https://github.com/snakemake-workflows

snakemake pipeline star slurm-cluster htseq-count stringtie ballgown fastqs

Updated Oct 27, 2020
R

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