📦 An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/
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Oct 31, 2024 - R
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icgc
Here are 11 public repositories matching this topic...
Legacy, see cancerit/PCAP-core: NGS reference implementations and helper code for the IGCG/TCGA Pan-Cancer Analysis Project
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Jun 12, 2024 - Perl
CG - cancer genomics pipeline
tcga
cancer-genomics
icgc
cancer-genomics-pipeline
cancer-data-interpretation
correlated-mutations-cancer
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Nov 28, 2021 - Python
A Nextflow pipeline to run featureCounts on RNAseq BAM files on ICGC in AWS/AWS Batch
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Aug 14, 2018 - Nextflow
Various utility scripts and ICGC DCC data specification templates / conversion tools written during early development work on the current ICGC DCC data portal (2.0)
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Nov 14, 2017 - Perl
A JBrowse plugin for viewing ICGC Data
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Mar 4, 2023 - JavaScript
Foc al Bosc: Visor incendis forestals Catalunya 1986-2017
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Mar 28, 2024 - JavaScript
Documentació i exemples de l'API Territorial de l'ICGC
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Oct 2, 2024 - HTML
Re-usable React Components for ICGC-ARGO sites
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Jan 25, 2024 - TypeScript
icgc storage client file provisioning plugin
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Aug 12, 2024 - Java
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