PySB add-on providing domain-specific macros and models for empirical and mechanistic PK/PD modeling.

Nitrogen balance model components and test procedures

The Dig4Bio worskhop series

Mechanistic Pan-Cancer Signaling Model

Simulation and inference of gene regulatory networks based on transcriptional bursting

PySB add-on providing utilities to add units to models and perform dimensional analysis.

This repository contains the codes for the article: Data-driven mechanistic modeling of oxygen distribution and hypoxia profile in tumor microenvironment