Tools for MRI mouse brain morphometry
DL+DiReCT - Direct Cortical Thickness Estimation using Deep Learning-based Anatomy Segmentation and Cortex Parcellation
A python module designed to reduce your brain load while accessing FreeSurfer brain surface and morphometry data files of single subjects and groups.
Fluvial Corridor Toolbox QGis Plugin
ITK filters that quantify bone morphometry
Symmetrization of 2D pattern using nonrigid landmark registration
implementation of the Bayesian Force Inference technique based on the work of Ishihara and Sugimura
Source code and workflow protocols for SOCR 3D Cell Morphometry Project
Brain Morphometry Estimation: From Hours to Seconds Using Deep Learning
Stereological macros for ImageJ
Fluvial Corridor Toolbox Applications
Cell counter integrated with Grid for manual morphometry
The aVP-Toolbox project proposes an innovative dedicated methodology to allow morphometric MRI analysis of the whole anterior visual pathway of the human brain.
for measuring curvature along the boundary of an image object
UNDER CONSTRUCTION: Mouse brain morphometry analysis pipeline for MRI imaging data
Morphometric analysis of neuromuscular junction microscopy images, and protein distribution and localisation analysis of immunohistochemically-labelled microscopy images.
The old, outdated code for my hippocampal morphometry pipeline.
Morphometric analysis of cells in microscopy images.
Current code for my hippocampal morphometry workflow, based on the hippodeep_pytorch segmentation program and the SlicerSALT shape analysis software.
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