Near-storage compute aware file system and FPGA operator pipelines.
User-Defined Functions for HDF5
NATSA is the first near-data-processing accelerator for time series analysis based on the Matrix Profile (SCRIMP) algorithm. NATSA exploits modern 3D-stacked High Bandwidth Memory (HBM) to enable efficient and fast matrix profile computation near memory. Described in ICCD 2020 by Fernandez et al. https://people.inf.ethz.ch/omutlu/pub/NATSA_time-…
GenStore is the first in-storage processing system designed for genome sequence analysis that greatly reduces both data movement and computational overheads of genome sequence analysis by exploiting low-cost and accurate in-storage filters. Described in the ASPLOS 2022 paper by Mansouri Ghiasi et al. at https://people.inf.ethz.ch/omutlu/pub/GenS…
PIMeval simulator and PIMbench suite
MegIS is the first in-storage processing system designed to significantly reduce the data movement overhead of the end-to-end metagenomic analysis pipeline. Described in the ISCA 2024 paper by Mansouri Ghiasi et al.: https://arxiv.org/pdf/2406.19113
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