Collects software dedicated to predicting specific properties of peptides

AutoML system for building trustworthy peptide bioactivity predictors

The one model for genesis of peptide ligands

This repository holds the code and notes during the use of Casanovo as part of my Research Project, as well as links to resources used as part of the Metaproteomic Analysis of my samples.

PyAMPA: The new version of the AMPA software

Species Identification and Prediction by Mass Spectrometry

Peptide Vaccine Analysis Tool (PVAT) is an optimization software that predicts the best possible peptide stretches in a given protein sequence based on two factors: 1. the surface exposure of the peptide stretches, and 2. their susceptibility to mutation.

Source code for a research currently under review in Nature Machine Intelligence