Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)
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Updated
Apr 3, 2024 - Python
Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)
Organelle Genome Assembler
Automated pipeline for assembly and annotation of plastid genomes
The MitoGeneExtractor can be used to extract protein coding mitochondrial genes, such as COI and others from short and long read sequencing libraries.
get chloroplast and mitochondrial genes from contigs of genome-skimming or transcriptome data
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