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laurentnoe / yass

genomic alignment similarity search tool

fasta sequence-alignments align-dna-sequences dna-sequences sequence-alignment fasta-sequences blastn genomic-data-analysis blast-search spaced-seed

Updated May 29, 2024
C

laurentnoe / storm

Star

Illumina (and SOLiD) sensitive read mapping tool (cloned from svn://scm.gforge.inria.fr/svnroot/storm/, original code from @marta- , with some work done by @yoann-dufresne)

incremental fasta fastq-format illumina fastq indels sequence-alignment illumina-sequencing read-mapping spaced-seed simd-intrinsics fasta-format openmp-parallelization sam-file sam-output

Updated Nov 16, 2017
C

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