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better family-level matching algorithms #202

Merged
merged 11 commits into from
Apr 30, 2024
Merged

better family-level matching algorithms #202

merged 11 commits into from
Apr 30, 2024

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ehwenk
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@ehwenk ehwenk commented Apr 23, 2024

Updates to the family-level matching algorithms to allow:

  • fuzzy matches to APC-accepted families
  • updates from APC-synonymous family names to accepted APC family names

(Does not deal with fuzzy matches to APC-synonymous family names and matches to family names only in APNI, because these are likely to be very rare occurrences.)

Add match to align typos in `family sp.` names.
Add synonym updates for APC families (e.g. Epacridaceae to Ericaceae, Gramineae to Poaceae)

(Also realised I'd deleted the synonymous genus fuzzy matches in previous commit; reinstating in next commit)
@ehwenk ehwenk requested a review from dfalster April 23, 2024 05:27
ehwenk and others added 6 commits April 29, 2024 10:10
There was really no good reason to exclude this - so now there are fuzzy/non-fuzzy matches for family level APC-accepted and APC-synonymous taxon names.

(Tests pass locally, but suspecting MacOS tests will still fail on GitHub)
@ehwenk ehwenk merged commit 3d409bc into develop Apr 30, 2024
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@ehwenk ehwenk deleted the More-family-matches branch April 30, 2024 01:22
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3 participants