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Initial work on a complex-valued fMRI preprocessing workflow. Dropped in favor of fMRIPost-phase.

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complex-flow

Initial work on a complex-valued fMRI preprocessing workflow.

Dropped in favor of fMRIPost-phase.

Goals

  • Processing of both magnitude and phase data for both single- and multi-echo data
  • BIDS Derivatives-compatible outputs
  • A user-friendly CLI
  • Support for phase-based denoising within the workflow (when applicable), including phase regression
  • Support for coil-level data
  • Dynamic distortion correction, for multi-echo data, with DOCMA
  • Support for field maps and single-band reference images
  • Long-term, I want to move any workflows produced here into tools like SDCFlows and niworkflows

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Initial work on a complex-valued fMRI preprocessing workflow. Dropped in favor of fMRIPost-phase.

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